- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.67 Å
- Oligo State
- hetero-4-4-mer
- Ligands
- 12 x CL: CHLORIDE ION(Non-functional Binders)
- 4 x GOL: GLYCEROL(Non-functional Binders)
GOL.2: 5 residues within 4Å:- Chain A: I.118, E.119, N.120, E.121
- Ligands: CL.1
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:E.119
GOL.10: 4 residues within 4Å:- Chain B: I.118, E.119, N.120, E.121
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:I.118, B:E.121
GOL.22: 5 residues within 4Å:- Chain E: I.118, E.119, N.120, E.121
- Ligands: CL.21
2 PLIP interactions:2 interactions with chain E- Hydrogen bonds: E:E.119, E:E.121
GOL.30: 4 residues within 4Å:- Chain F: I.118, E.119, N.120, E.121
2 PLIP interactions:2 interactions with chain F- Hydrogen bonds: F:I.118, F:E.121
- 22 x NA: SODIUM ION(Non-functional Binders)
NA.4: 5 residues within 4Å:- Chain A: I.83, Y.107
- Chain F: I.83, Y.107
- Ligands: NA.34
Ligand excluded by PLIPNA.5: 1 residues within 4Å:- Chain A: E.139
Ligand excluded by PLIPNA.6: 2 residues within 4Å:- Chain A: Y.91, K.93
Ligand excluded by PLIPNA.9: 4 residues within 4Å:- Chain A: F.11
- Chain B: K.164, N.168
- Ligands: CL.8
Ligand excluded by PLIPNA.11: 4 residues within 4Å:- Chain B: F.18, K.149, D.152, S.153
Ligand excluded by PLIPNA.13: 5 residues within 4Å:- Chain B: A.54, D.55, S.56, E.119
- Ligands: CL.12
Ligand excluded by PLIPNA.14: 5 residues within 4Å:- Chain B: I.83, Y.107
- Chain E: I.83, Y.107
- Ligands: NA.24
Ligand excluded by PLIPNA.15: 4 residues within 4Å:- Chain A: N.68
- Chain B: S.57, W.60, D.156
Ligand excluded by PLIPNA.16: 3 residues within 4Å:- Chain B: N.68, K.164, E.167
Ligand excluded by PLIPNA.18: 1 residues within 4Å:- Chain B: K.177
Ligand excluded by PLIPNA.19: 1 residues within 4Å:- Ligands: CL.17
Ligand excluded by PLIPNA.24: 5 residues within 4Å:- Chain B: I.83, Y.107
- Chain E: I.83, Y.107
- Ligands: NA.14
Ligand excluded by PLIPNA.25: 1 residues within 4Å:- Chain E: E.139
Ligand excluded by PLIPNA.26: 2 residues within 4Å:- Chain E: Y.91, K.93
Ligand excluded by PLIPNA.29: 4 residues within 4Å:- Chain E: F.11
- Chain F: K.164, N.168
- Ligands: CL.28
Ligand excluded by PLIPNA.31: 4 residues within 4Å:- Chain F: F.18, K.149, D.152, S.153
Ligand excluded by PLIPNA.33: 5 residues within 4Å:- Chain F: A.54, D.55, S.56, E.119
- Ligands: CL.32
Ligand excluded by PLIPNA.34: 5 residues within 4Å:- Chain A: I.83, Y.107
- Chain F: I.83, Y.107
- Ligands: NA.4
Ligand excluded by PLIPNA.35: 4 residues within 4Å:- Chain E: N.68
- Chain F: S.57, W.60, D.156
Ligand excluded by PLIPNA.36: 3 residues within 4Å:- Chain F: N.68, K.164, E.167
Ligand excluded by PLIPNA.38: 1 residues within 4Å:- Chain F: K.177
Ligand excluded by PLIPNA.39: 1 residues within 4Å:- Ligands: CL.37
Ligand excluded by PLIP- 2 x ACT: ACETATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Natrajan, G. et al., The Structure of a Dnaa/Hoba Complex from Helicobacter Pylori Provides Insight Into Regulation of DNA Replication in Bacteria. Proc.Natl.Acad.Sci.USA (2009)
- Release Date
- 2009-11-17
- Peptides
- HOBA: ABEF
CHROMOSOMAL REPLICATION INITIATOR PROTEIN DNAA: CDGH - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BE
AF
BC
CD
DG
CH
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.67 Å
- Oligo State
- hetero-4-4-mer
- Ligands
- 12 x CL: CHLORIDE ION(Non-functional Binders)
- 4 x GOL: GLYCEROL(Non-functional Binders)
- 22 x NA: SODIUM ION(Non-functional Binders)
- 2 x ACT: ACETATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Natrajan, G. et al., The Structure of a Dnaa/Hoba Complex from Helicobacter Pylori Provides Insight Into Regulation of DNA Replication in Bacteria. Proc.Natl.Acad.Sci.USA (2009)
- Release Date
- 2009-11-17
- Peptides
- HOBA: ABEF
CHROMOSOMAL REPLICATION INITIATOR PROTEIN DNAA: CDGH - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BE
AF
BC
CD
DG
CH
D