SMTL ID : 2wqh.1

Crystal structure of CTPR3Y3

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

2 x MRD: (4R)-2-METHYLPENTANE-2,4-DIOL(Non-functional Binders)

MRD.1: 3 residues within 4Å: Chain A: Q.67, L.70, E.71 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Q.67, A:L.70, A:E.71 MRD.5: 3 residues within 4Å: Chain B: Q.67, L.70, E.71 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:Q.67, B:L.70, B:E.71

2 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.2: 3 residues within 4Å: Chain A: Q.56, G.57, D.58 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:D.58 MPD.6: 3 residues within 4Å: Chain B: Q.56, G.57, D.58 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:D.58

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 5 residues within 4Å: Chain A: Y.20, N.51, Y.54, K.55, N.82 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.82 EDO.4: 4 residues within 4Å: Chain A: P.40, N.41, W.46, K.68 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.41 EDO.7: 5 residues within 4Å: Chain B: Y.20, N.51, Y.54, K.55, N.82 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Y.20, B:N.82 EDO.8: 4 residues within 4Å: Chain B: P.40, N.41, W.46, K.68 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.41

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Krachler, A.M. et al., Self-association of TPR domains: Lessons learned from a designed, consensus-based TPR oligomer. Proteins (2010)

Release Date

2010-04-07

Peptides

CTPR3Y3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

CTPR3Y3