SMTL ID : 2wqk.1

Crystal Structure of Sure Protein from Aquifex aeolicus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-tetramer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 9 residues within 4Å: Chain A: D.9, S.40, H.44, N.94, N.98, S.106, G.107, T.108 Ligands: NA.2 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:S.40, A:N.94, A:N.94, A:N.98, A:G.107, A:T.108 Water bridges: A:S.40 SO4.3: 9 residues within 4Å: Chain B: D.9, S.40, H.44, N.94, N.98, S.106, G.107, T.108 Ligands: NA.4 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:N.94, B:N.94, B:N.98, B:S.106, B:G.107, B:T.108 Water bridges: B:S.40 SO4.5: 9 residues within 4Å: Chain C: D.9, S.40, H.44, N.94, N.98, S.106, G.107, T.108 Ligands: NA.6 9 PLIP interactions: 9 interactions with chain C Hydrogen bonds: C:D.9, C:S.40, C:N.94, C:N.94, C:N.98, C:G.107, C:T.108, C:T.108 Water bridges: C:S.40 SO4.7: 9 residues within 4Å: Chain D: D.9, S.40, H.44, N.94, N.98, S.106, G.107, T.108 Ligands: NA.8 9 PLIP interactions: 9 interactions with chain D Hydrogen bonds: D:D.9, D:N.94, D:N.94, D:N.98, D:S.106, D:G.107, D:T.108, D:T.108 Water bridges: D:S.40

4 x NA: SODIUM ION(Non-functional Binders)

NA.2: 4 residues within 4Å: Chain A: D.10, S.40, N.94 Ligands: SO4.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.10, A:N.94 Water bridges: A:N.38 NA.4: 4 residues within 4Å: Chain B: D.10, S.40, N.94 Ligands: SO4.3 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:S.40, B:N.94 Water bridges: B:N.38 NA.6: 4 residues within 4Å: Chain C: D.10, S.40, N.94 Ligands: SO4.5 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:S.40, C:N.94 Water bridges: C:E.95 NA.8: 4 residues within 4Å: Chain D: D.10, S.40, N.94 Ligands: SO4.7 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:D.10, D:N.94 Water bridges: D:E.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Antonyuk, S.V. et al., Structure of Sure Protein from Aquifex Aeolicus Vf5 at 1.5 A Resolution. Acta Crystallogr.,Sect.F (2009)

Release Date

2009-09-29

Peptides

5'-NUCLEOTIDASE SURE: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

5'-NUCLEOTIDASE SURE