SMTL ID : 2wr6.1

Structure of the complex of RBP4 with linoleic acid

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 2 residues within 4Å: Chain A: S.8, G.128 Ligand excluded by PLIP

1 x ODT: (11E,13E,15Z)-OCTADECA-11,13,15-TRIENOIC ACID(Non-covalent)

ODT.2: 21 residues within 4Å: Chain A: K.30, P.33, L.36, F.37, L.38, A.44, F.46, A.56, T.57, A.58, M.74, V.75, G.76, M.89, Y.91, H.105, Q.118, R.122, Y.134, F.136, F.138 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:L.38, A:A.44, A:F.46, A:A.56, A:A.58, A:M.74, A:Y.91, A:Y.91, A:Y.134, A:Y.134, A:F.136, A:F.136, A:F.138 Hydrogen bonds: A:F.37, A:L.38 Water bridges: A:R.122 Salt bridges: A:K.30

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huang, H.-J. et al., Identification of a Non-Retinoid Compound and Fatty Acids as Ligands for Retinol Binding Protein 4 and Their Implications in Diabetes. To be Published

Release Date

2010-09-15

Peptides

RETINOL-BINDING PROTEIN 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RETINOL-BINDING PROTEIN 4