SMTL ID : 2wre.1

structure of H2 japan hemagglutinin with human receptor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-trimer

Ligands

3 x GAL- SIA: N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose(Non-covalent)

GAL-SIA.1: 13 residues within 4Å: Chain A: Y.106, G.144, G.145, S.146, Q.147, T.165, H.193, E.200, L.204, K.232, G.235, L.236, S.238 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:G.235, A:Y.106, A:G.145, A:G.145, A:Q.147, A:E.200, A:S.238 Hydrophobic interactions: A:T.165, A:L.204 GAL-SIA.2: 12 residues within 4Å: Chain B: Y.106, G.144, G.145, S.146, Q.147, W.163, H.193, E.200, L.204, K.232, L.236, S.238 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:W.163 Hydrogen bonds: B:G.145, B:Q.147, B:E.200, B:S.238 GAL-SIA.3: 13 residues within 4Å: Chain C: Y.106, G.144, G.145, S.146, Q.147, W.163, H.193, E.200, L.204, K.232, G.235, L.236, S.238 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:G.235, C:G.145, C:Q.147, C:E.200, C:S.238 Hydrophobic interactions: C:L.204

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, J. et al., From the Cover: Structures of Receptor Complexes Formed by Hemagglutinins from the Asian Influenza Pandemic of 1957. Proc.Natl.Acad.Sci.USA (2009)

Release Date

2009-09-29

Peptides

HEMAGGLUTININ: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

HEMAGGLUTININ