SMTL ID : 2wrh.1

structure of H1 duck albert hemagglutinin with human receptor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

hetero-3-3-mer

Ligands

3 x SIA: N-acetyl-alpha-neuraminic acid(Non-covalent)

SIA.1: 11 residues within 4Å: Chain A: Y.90, K.128, G.129, V.130, T.131, A.132, W.148, H.178, E.185, L.189, Q.221 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.189 Hydrogen bonds: A:Y.90, A:V.130, A:T.131, A:A.132, A:E.185, A:Q.221, A:Q.221, A:Q.221 SIA.2: 11 residues within 4Å: Chain C: Y.90, K.128, G.129, V.130, T.131, A.132, W.148, H.178, E.185, L.189, Q.221 9 PLIP interactions: 9 interactions with chain C Hydrophobic interactions: C:L.189 Hydrogen bonds: C:V.130, C:V.130, C:T.131, C:A.132, C:E.185, C:Q.221, C:Q.221, C:Q.221 SIA.3: 11 residues within 4Å: Chain E: Y.90, K.128, G.129, V.130, T.131, A.132, W.148, H.178, E.185, L.189, Q.221 10 PLIP interactions: 10 interactions with chain E Hydrophobic interactions: E:L.189 Hydrogen bonds: E:Y.90, E:V.130, E:V.130, E:T.131, E:A.132, E:E.185, E:Q.221, E:Q.221, E:Q.221

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, J. et al., Structures of Receptor Complexes Formed by Hemagglutinins from the Asian Influenza Pandemic of 1957. Proc.Natl.Acad.Sci.USA (2009)

Release Date

2009-09-29

Peptides

HEMAGGLUTININ HA1 CHAIN: ACE
HEMAGGLUTININ HA2 CHAIN: BDF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

C
J

E
L

B
I

D
K

F
M

HEMAGGLUTININ HA1 CHAIN

HEMAGGLUTININ HA2 CHAIN