SMTL ID : 2wya.2 (1 other biounit)

CRYSTAL STRUCTURE OF HUMAN MITOCHONDRIAL 3-HYDROXY-3-METHYLGLUTARYL- COENZYME A SYNTHASE 2 (HMGCS2)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

2 x HMG: 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A(Non-covalent)

HMG.1: 28 residues within 4Å: Chain A: E.32, A.33, G.34, K.35, V.38, G.39, E.84, A.117, C.118, Y.152, N.156, A.157, T.160, F.193, V.205, G.207, S.210, Y.214, H.253, P.255, F.256, K.258, K.262, N.332, Y.334, Y.364, G.365, S.366 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:F.193, A:V.205, A:F.256, A:Y.364 Hydrogen bonds: A:A.33, A:E.84, A:C.118, A:N.156, A:T.160, A:S.210, A:S.210, A:H.253, A:N.332, A:S.366 Water bridges: A:T.160, A:G.207 Salt bridges: A:K.35, A:K.258, A:K.262 HMG.3: 28 residues within 4Å: Chain B: E.32, A.33, G.34, K.35, V.38, G.39, E.84, A.117, C.118, Y.152, N.156, A.157, T.160, F.193, V.205, G.207, S.210, Y.214, H.253, P.255, F.256, K.258, K.262, N.332, Y.334, Y.364, G.365, S.366 20 PLIP interactions: 20 interactions with chain B Hydrophobic interactions: B:F.193, B:V.205, B:F.256, B:Y.364 Hydrogen bonds: B:E.32, B:E.84, B:C.118, B:N.156, B:T.160, B:T.160, B:S.210, B:S.210, B:H.253, B:N.332, B:S.366 Water bridges: B:G.207, B:K.258 Salt bridges: B:K.35, B:K.258, B:K.262

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 2 residues within 4Å: Chain A: S.392, S.395 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.392, A:S.395

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shafqat, N. et al., Crystal Structures of Human Hmg-Coa Synthase Isoforms Provide Insights Into Inherited Ketogenesis Disorders and Inhibitor Design. J.Mol.Biol. (2010)

Release Date

2009-11-24

Peptides

HYDROXYMETHYLGLUTARYL-COA SYNTHASE, MITOCHONDRIAL: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

HYDROXYMETHYLGLUTARYL-COA SYNTHASE, MITOCHONDRIAL

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