SMTL ID : 2wza.1

Two intramolecular isopeptide bonds are identified in the crystal structure of the Streptococcus gordonii SspB C-terminal domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.08 Å

Oligo State

monomer

Ligands

3 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: D.94, Y.95, E.97, K.147, G.148, A.149 6 PLIP interactions: 5 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.94, A:Y.95, A:E.97, A:K.147, A:A.149, H2O.2 CA.2: 5 residues within 4Å: Chain A: D.269, Y.270, Q.272, N.315, G.316 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.269, A:Y.270, A:N.315, A:G.316, H2O.5 CA.3: 4 residues within 4Å: Chain A: Y.38, D.71, D.73, Q.74 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:Y.38, A:D.71, A:D.73, H2O.1, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Forsgren, N. et al., Two Intramolecular Isopeptide Bonds are Identified in the Crystal Structure of the Streptococcus Gordonii Sspb C-Terminal Domain. J.Mol.Biol. (2010)

Release Date

2010-02-16

Peptides

AGGLUTININ RECEPTOR: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

AGGLUTININ RECEPTOR