SMTL ID : 2wzf.1

Legionella pneumophila glucosyltransferase crystal structure

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 3 residues within 4Å: Chain A: D.246 Ligands: UDP.2, BGC.3 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.246, H2O.12, H2O.12, H2O.13

1 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)

UDP.2: 19 residues within 4Å: Chain A: I.138, W.139, F.140, P.225, A.226, S.229, R.233, Y.244, D.246, I.247, D.248, N.499, N.514, G.517, L.518, S.519, W.520 Ligands: MN.1, BGC.3 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:I.138, A:F.140, A:F.140, A:S.229, A:I.247, A:N.499, A:N.514, A:L.518, A:S.519, A:S.519 Water bridges: A:I.138, A:D.248, A:N.514 pi-Stacking: A:W.139

1 x BGC: beta-D-glucopyranose(Non-covalent)

BGC.3: 13 residues within 4Å: Chain A: A.226, D.230, R.233, D.246, N.293, D.295, V.444, G.449, P.450, N.499, W.520 Ligands: MN.1, UDP.2 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:D.230, A:R.233, A:R.233, A:D.246, A:N.293, A:N.499 Water bridges: A:D.295

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hurtado-Guerrero, R. et al., Molecular Mechanism of Elongation Factor 1A Inhibition by a Legionella Pneumophila Glycosyltransferase. Biochem.J. (2010)

Release Date

2009-12-08

Peptides

GLUCOSYLTRANSFERASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

GLUCOSYLTRANSFERASE