SMTL ID : 2wzh.1

BtGH84 D242N in complex with MeUMB-derived oxazoline

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x NGO: 2-METHYL-4,5-DIHYDRO-(1,2-DIDEOXY-ALPHA-D-GLUCOPYRANOSO)[2,1-D]-1,3-OXAZOLE(Non-covalent)

NGO.1: 16 residues within 4Å: Chain A: G.156, F.157, Y.158, K.187, N.263, D.264, C.299, Y.303, T.331, V.335, W.358, N.360, V.363, D.365, Y.366, N.393 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:Y.303, A:T.331, A:W.358 Hydrogen bonds: A:G.156, A:Y.158, A:N.263, A:N.360, A:D.365, A:N.393 Water bridges: A:G.156, A:K.187, A:Y.303

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain A: P.375, Y.377, W.421, E.459, M.462 1 PLIP interactions: 1 interactions with chain A Water bridges: A:Y.377

1 x CA: CALCIUM ION(Non-covalent)

CA.3: 3 residues within 4Å: Chain A: E.53, E.82, D.85 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.53, A:E.82, A:D.85, A:D.85, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

He, Y. et al., Visualizing the Reaction Coordinate of an O-Glcnac Hydrolase. J.Am.Chem.Soc. (2010)

Release Date

2010-01-26

Peptides

O-GLCNACASE BT_4395: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

O-GLCNACASE BT_4395

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