SMTL ID : 2x1h.1 (1 other biounit)

Crystal structure of the human MGC45594 gene product in complex with raloxifene

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 7 residues within 4Å: Chain A: G.159, G.160, K.165, D.233, V.234, K.254, R.256 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.160, A:K.254 Water bridges: A:K.165, A:K.165, A:D.233, A:R.256 EDO.2: 2 residues within 4Å: Chain A: P.135, L.311 1 PLIP interactions: 1 interactions with chain A Water bridges: A:E.312 EDO.3: 4 residues within 4Å: Chain A: R.342, N.345, Y.346, M.349 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.342, A:Y.346 Water bridges: A:R.342

1 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.4: 30 residues within 4Å: Chain A: N.66, A.67, S.68, V.146, T.150, A.171, G.174, G.175, T.176, T.194, C.195, S.196, K.200, Y.215, S.238, V.239, I.260, G.261, F.262, I.263, S.264, Y.266, F.294, F.295, L.296, M.347, Y.348, G.350, N.352 Ligands: X1H.5 30 PLIP interactions: 30 interactions with chain A Hydrophobic interactions: A:V.146, A:T.150 Hydrogen bonds: A:A.67, A:S.68, A:T.150, A:G.175, A:T.176, A:S.196, A:S.196, A:K.200, A:S.238, A:I.260, A:I.263, A:Y.266, A:L.296, A:N.352, A:N.352 Water bridges: A:S.68, A:S.147, A:S.147, A:A.171, A:G.174, A:G.177, A:T.194, A:S.196, A:Y.215, A:S.264, A:Q.267, A:Y.348 Salt bridges: A:K.200

2 x X1H: [6-HYDROXY-2-(4-HYDROXYPHENYL)-1-BENZOTHIOPHEN-3-YL](4-METHOXYPHENYL)METHANONE(Non-covalent)

X1H.5: 11 residues within 4Å: Chain A: S.68, N.71, R.76, Y.77, F.262, Y.266, T.270, G.271, L.272, F.295 Ligands: NAP.4 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:Y.77, A:F.262, A:F.262, A:L.272, A:F.295 Hydrogen bonds: A:S.68 Water bridges: A:S.68, A:Y.77 X1H.6: 9 residues within 4Å: Chain A: A.151, Y.152, L.155, K.156, L.183, K.186, A.187, H.309, M.313 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.183, A:L.183, A:K.186, A:K.186, A:A.187 Hydrogen bonds: A:Y.152 pi-Stacking: A:Y.152

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shafqat, N. et al., Crystal Structure of the Human Mgc45594 Gene Product in Complex with Raloxifene. To be Published

Release Date

2010-11-10

Peptides

ZINC-BINDING ALCOHOL DEHYDROGENASE DOMAIN-CONTAINING PROTEIN 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ZINC-BINDING ALCOHOL DEHYDROGENASE DOMAIN-CONTAINING PROTEIN 2

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