SMTL ID : 2x42.1

Structure of beta-glucosidase 3B from Thermotoga neapolitana in complex with alpha-D-glucose

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x GLC: alpha-D-glucopyranose(Non-covalent)

GLC.1: 14 residues within 4Å: Chain A: A.40, D.58, R.64, L.116, R.130, K.163, H.164, R.174, M.207, Y.210, A.242, W.243, S.370, E.458 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:R.64, A:R.130, A:R.130, A:K.163, A:H.164, A:R.174, A:Y.210, A:W.243, A:S.370, A:E.458 Water bridges: A:K.163

4 x BR: BROMIDE ION(Non-covalent)

BR.2: 3 residues within 4Å: Chain A: R.340, R.509, Y.592 Ligand excluded by PLIP BR.3: 5 residues within 4Å: Chain A: R.454, I.455, S.456, G.500, S.501 Ligand excluded by PLIP BR.4: 6 residues within 4Å: Chain A: N.121, I.122, A.167, N.169, Y.190, F.194 Ligand excluded by PLIP BR.5: 3 residues within 4Å: Chain A: T.558, V.570, V.571 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pozzo, T. et al., Structural and Functional Analysis of Beta-Glucosidase 3B from Thermotoga Neapolitana: A Thermostable 3-Domain Representative of Glycoside Hydrolase Family 3. J.Mol.Biol. (2010)

Release Date

2010-02-09

Peptides

BETA-GLUCOSIDASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

BETA-GLUCOSIDASE