SMTL ID : 2x5g.1

Crystal structure of the ORF131L51M mutant from Sulfolobus islandicus rudivirus 1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

6 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 3 residues within 4Å: Chain A: R.33, S.55, G.64 Ligand excluded by PLIP CL.2: 4 residues within 4Å: Chain A: K.82, Y.83, D.85, F.86 Ligand excluded by PLIP CL.3: 4 residues within 4Å: Chain A: L.26, I.28, V.35, V.36 Ligand excluded by PLIP CL.6: 3 residues within 4Å: Chain B: R.33, S.55, G.64 Ligand excluded by PLIP CL.7: 4 residues within 4Å: Chain B: K.82, Y.83, D.85, F.86 Ligand excluded by PLIP CL.8: 4 residues within 4Å: Chain B: L.26, I.28, V.35, V.36 Ligand excluded by PLIP

4 x MLI: MALONATE ION(Non-functional Binders)

MLI.4: 6 residues within 4Å: Chain A: K.27, I.28, K.29, F.79, K.82 Ligands: MLI.5 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.79 Hydrogen bonds: A:K.29 Salt bridges: A:K.82 Water bridges: A:L.75 MLI.5: 7 residues within 4Å: Chain A: A.2, L.4, I.7, L.26, K.27, F.79 Ligands: MLI.4 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.2, A:K.27 MLI.9: 6 residues within 4Å: Chain B: K.27, I.28, K.29, F.79, K.82 Ligands: MLI.10 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:F.79 Hydrogen bonds: B:K.29 Salt bridges: B:K.82 Water bridges: B:L.75 MLI.10: 7 residues within 4Å: Chain B: A.2, L.4, I.7, L.26, K.27, F.79 Ligands: MLI.9 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:A.2, B:K.27

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Oke, M. et al., The Scottish Structural Proteomics Facility: Targets, Methods and Outputs. J.Struct.Funct.Genom. (2010)

Release Date

2010-07-21

Peptides

ORF 131: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

ORF 131