SMTL ID : 2x6u.1

Crystal structure of human TBX5 in the DNA-free form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x PE4: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL(Non-functional Binders)

PE4.1: 6 residues within 4Å: Chain A: V.8, T.155, H.156, V.157, F.158, P.159 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:V.8, A:V.157 Water bridges: A:V.8, A:T.155

4 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 2 residues within 4Å: Chain A: K.30, N.114 No protein-ligand interaction detected (PLIP) MG.3: 3 residues within 4Å: Chain A: H.64, G.77, K.78 No protein-ligand interaction detected (PLIP) MG.4: 2 residues within 4Å: Chain A: R.33, R.34 No protein-ligand interaction detected (PLIP) MG.5: 1 residues within 4Å: Chain A: W.73 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stirnimann, C.U. et al., Structural Basis of Tbx5-DNA Recognition: The T-Box Domain in its DNA-Bound and -Unbound Form. J.Mol.Biol. (2010)

Release Date

2010-04-28

Peptides

T-BOX TRANSCRIPTION FACTOR TBX5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

T-BOX TRANSCRIPTION FACTOR TBX5

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