- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x ZN: ZINC ION(Non-covalent)
- 4 x SRT: S,R MESO-TARTARIC ACID(Non-covalent)
SRT.2: 9 residues within 4Å:- Chain A: P.8, N.9, G.10, S.11, G.12, K.13, R.126
- Chain B: N.131, N.132
15 PLIP interactions:13 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:P.8, A:G.10, A:S.11, A:G.12, A:K.13, A:R.126, B:N.131, B:N.132
- Water bridges: A:N.9, A:K.13, A:K.13, A:G.14, A:G.14
- Salt bridges: A:K.13, A:R.126
SRT.4: 9 residues within 4Å:- Chain A: N.131, N.132
- Chain B: P.8, N.9, G.10, S.11, G.12, K.13, R.126
15 PLIP interactions:13 interactions with chain B, 2 interactions with chain A- Hydrogen bonds: B:P.8, B:G.10, B:S.11, B:G.12, B:K.13, B:R.126, A:N.131, A:N.132
- Water bridges: B:N.9, B:K.13, B:K.13, B:G.14, B:G.14
- Salt bridges: B:K.13, B:R.126
SRT.6: 9 residues within 4Å:- Chain C: P.8, N.9, G.10, S.11, G.12, K.13, R.126
- Chain D: N.131, N.132
15 PLIP interactions:13 interactions with chain C, 2 interactions with chain D- Hydrogen bonds: C:P.8, C:G.10, C:S.11, C:G.12, C:K.13, C:R.126, D:N.131, D:N.132
- Water bridges: C:N.9, C:K.13, C:K.13, C:G.14, C:G.14
- Salt bridges: C:K.13, C:R.126
SRT.8: 9 residues within 4Å:- Chain C: N.131, N.132
- Chain D: P.8, N.9, G.10, S.11, G.12, K.13, R.126
15 PLIP interactions:13 interactions with chain D, 2 interactions with chain C- Hydrogen bonds: D:P.8, D:G.10, D:S.11, D:G.12, D:K.13, D:R.126, C:N.131, C:N.132
- Water bridges: D:N.9, D:K.13, D:K.13, D:G.14, D:G.14
- Salt bridges: D:K.13, D:R.126
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mukhopadhyay, A. et al., Crystal Structure of the Zinc-, Cobalt-, and Iron-Containing Adenylate Kinase from Desulfovibrio Gigas: A Novel Metal-Containing Adenylate Kinase from Gram-Negative Bacteria. J.Biol.Inorg.Chem. (2011)
- Release Date
- 2010-09-22
- Peptides
- ADENYLATE KINASE: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x ZN: ZINC ION(Non-covalent)
- 4 x SRT: S,R MESO-TARTARIC ACID(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mukhopadhyay, A. et al., Crystal Structure of the Zinc-, Cobalt-, and Iron-Containing Adenylate Kinase from Desulfovibrio Gigas: A Novel Metal-Containing Adenylate Kinase from Gram-Negative Bacteria. J.Biol.Inorg.Chem. (2011)
- Release Date
- 2010-09-22
- Peptides
- ADENYLATE KINASE: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A