SMTL ID : 2xd4.1

Nucleotide-bound Structures of Bacillus subtilis Glycinamide Ribonucleotide Synthetase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.65 Å

Oligo State

monomer

Ligands

3 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: E.100, E.283, N.285 Ligands: ADP.4 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.283, A:E.283, H2O.3 MG.2: 1 residues within 4Å: Chain A: Q.306 No protein-ligand interaction detected (PLIP) MG.3: 3 residues within 4Å: Chain A: K.214, E.283 Ligands: ADP.4 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.283

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.4: 16 residues within 4Å: Chain A: K.103, V.141, K.143, G.150, V.153, E.185, E.186, Y.187, L.188, E.192, K.214, M.273, I.282, E.283 Ligands: MG.1, MG.3 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:K.143, A:E.185, A:L.188, A:E.192, A:K.214, A:E.283 Water bridges: A:G.150, A:G.150, A:E.283, A:N.285 Salt bridges: A:K.103, A:K.103, A:K.143, A:K.214

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bertrand, J.A. et al., Nucleotide-Bound Structures of Bacillus Subtilis Glycinamide Ribonucleotide Synthetase. To be Published

Release Date

2011-03-23

Peptides

PHOSPHORIBOSYLAMINE--GLYCINE LIGASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PHOSPHORIBOSYLAMINE--GLYCINE LIGASE

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