SMTL ID : 2xe8.1

The complete reaction cycle of human phosphoglycerate kinase: The open ternary complex with 3PG and AMP-PNP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.79 Å

Oligo State

monomer

Ligands

1 x 3PG: 3-PHOSPHOGLYCERIC ACID(Non-covalent)

3PG.1: 10 residues within 4Å: Chain A: D.24, N.26, R.39, H.63, R.66, R.123, G.167, T.168, H.170, R.171 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:D.24, A:N.26, A:R.39 Water bridges: A:R.39, A:R.123, A:R.123, A:R.171 Salt bridges: A:R.39, A:H.63, A:R.66, A:R.123, A:R.171

1 x ACP: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER(Non-covalent)

ACP.2: 13 residues within 4Å: Chain A: G.214, A.215, K.216, G.238, G.239, F.242, L.257, G.313, L.314, G.341, V.342, E.344, D.375 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:A.215, A:K.216, A:G.239, A:G.313, A:E.344, A:D.375 Water bridges: A:G.238 Salt bridges: A:K.220

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zerrad, L. et al., A Spring Loaded Release Mechanism Regulates Domain Movement and Catalysis in Phosphoglycerate Kinase. J.Biol.Chem. (2011)

Release Date

2011-01-19

Peptides

PHOSPHOGLYCERATE KINASE 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PHOSPHOGLYCERATE KINASE 1

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