SMTL ID : 2xem.1

Induced-fit and allosteric effects upon polyene binding revealed by crystal structures of the Dynemicin thioesterase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-tetramer

Ligands

1 x SSV: (3E,5E,7E,9E,11E,13E)-pentadeca-3,5,7,9,11,13-hexaen-2-one(Non-covalent)

SSV.1: 10 residues within 4Å: Chain A: F.19 Chain B: R.41, E.42, F.44, L.62, M.85, L.87, M.97, L.142 Chain D: V.25 14 PLIP interactions: 12 interactions with chain B, 1 interactions with chain D, 1 interactions with chain A Hydrophobic interactions: B:R.41, B:R.41, B:F.44, B:F.44, B:F.44, B:F.44, B:L.62, B:L.87, B:L.142, D:V.25, A:F.19 Hydrogen bonds: B:R.41, B:E.42 Water bridges: B:R.41

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liew, C.W. et al., Induced-Fit Upon Ligand Binding Revealed by Crystal Structures of the Hot-Dog Fold Thioesterase in Dynemicin Biosynthesis. J.Mol.Biol. (2010)

Release Date

2010-10-13

Peptides

DYNE7: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

DYNE7