SMTL ID : 2xfm.1

Complex structure of the MIWI Paz domain bound to methylated single stranded RNA

Coordinates

PDB Format Compare

Method

SOLUTION NMR

Oligo State

monomer

Ligands

1 x A- C- C- G- A- C- U- OMU: 5'-R(*AP*CP*CP*GP*AP*CP*UP*(OMU)P)-3'(Non-covalent)

A-C-C-G-A-C-U-OMU.1: 21 residues within 4Å: Chain A: G.31, I.33, V.34, Y.38, K.41, T.42, Y.43, R.44, F.58, K.59, K.60, F.68, Y.71, R.94, P.103, P.105, A.106, M.107, L.108, L.118, D.120 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Y.38, A:Y.43, A:K.59, A:K.60, A:M.107, A:M.107

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Simon, B. et al., Recognition of 2'-O-Methylated 3'-End of Pirna by the Paz Domain of a Piwi Protein. Structure (2011)

Release Date

2011-01-26

Peptides

PIWI-LIKE PROTEIN 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PIWI-LIKE PROTEIN 1