SMTL ID : 2xfv.1

STRUCTURE OF THE AMINO-TERMINAL DOMAIN FROM THE CELL-CYCLE REGULATOR SWI6

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

3 x CA: CALCIUM ION(Non-covalent)

CA.1: 2 residues within 4Å: Chain A: E.106 Chain B: D.101 5 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B, 3 Ligand-Water interactions Metal complexes: A:E.106, B:D.101, H2O.167, H2O.314, H2O.319 CA.2: 4 residues within 4Å: Chain A: L.30, K.31, L.34, R.60 No protein-ligand interaction detected (PLIP) CA.6: 4 residues within 4Å: Chain B: L.30, K.31, L.34, R.60 No protein-ligand interaction detected (PLIP)

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain A: Y.67, I.69, K.85, Q.88, L.89 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.67, A:K.85, A:Q.88 Water bridges: A:Y.67 GOL.7: 4 residues within 4Å: Chain B: Y.67, K.85, Q.88, M.92 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:Y.67, B:K.85, B:Q.88 Water bridges: B:Q.88 GOL.8: 4 residues within 4Å: Chain B: D.57, R.60, G.77, E.78 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:D.57, B:R.60, B:R.60 Water bridges: B:E.78

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.4: 3 residues within 4Å: Chain A: L.29, K.31 Ligands: CAC.5 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:K.31, A:H.32

1 x CAC: CACODYLATE ION(Non-covalent)

CAC.5: 5 residues within 4Å: Chain A: L.2, L.29, R.76, E.78 Ligands: ACT.4 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Taylor, I.A. et al., Structure of the Amino-Terminal Domain from the Cell-Cycle Regulator Swi6S. Proteins (2010)

Release Date

2010-06-23

Peptides

REGULATORY PROTEIN SWI6: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

REGULATORY PROTEIN SWI6