SMTL ID : 2xgy.1

COMPLEX OF RABBIT ENDOGENOUS LENTIVIRUS (RELIK)CAPSID WITH CYCLOPHILIN A

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

hetero-oligomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: N.53, L.56, N.57, I.70, I.73, R.103, Y.124 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.57, A:R.103, A:Y.124 GOL.2: 5 residues within 4Å: Chain A: W.80, H.84 Chain B: G.67, F.68, W.129 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:H.84 Water bridges: A:L.97, B:K.126

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Goldstone, D.C. et al., Structural and Functional Analysis of Prehistoric Lentiviruses Uncovers an Ancient Molecular Interface. Cell Host Microbe (2010)

Release Date

2010-09-22

Peptides

RELIK CAPSID N-TERMINAL DOMAIN: A
PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

RELIK CAPSID N-TERMINAL DOMAIN

PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A

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