SMTL ID : 2xms.1

Crystal structure of human NDRG2 protein provides insight into its role as a tumor suppressor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

homo-dimer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 5 residues within 4Å: Chain A: Y.18, F.46, R.60, H.62 Ligands: IMD.2 Ligand excluded by PLIP CL.4: 5 residues within 4Å: Chain B: Y.18, F.46, R.60, H.62 Ligands: IMD.5 Ligand excluded by PLIP

4 x IMD: IMIDAZOLE(Non-covalent)

IMD.2: 8 residues within 4Å: Chain A: Y.18, Y.38, K.39, F.42, Q.43, F.46, H.62 Ligands: CL.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.39, A:H.62 pi-Stacking: A:H.62 IMD.3: 7 residues within 4Å: Chain A: N.37, Y.38, K.39, D.64, M.68, E.69, E.70 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.64, A:E.70 IMD.5: 8 residues within 4Å: Chain B: Y.18, Y.38, K.39, F.42, Q.43, F.46, H.62 Ligands: CL.4 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:K.39, B:H.62 pi-Stacking: B:H.62 IMD.6: 7 residues within 4Å: Chain B: N.37, Y.38, K.39, D.64, M.68, E.69, E.70 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:D.64, B:E.70

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hwang, J. et al., Crystal Structure of Human Ndrg2 Protein Provides Insight Into its Role as a Tumor Suppressor. J.Biol.Chem. (2011)

Release Date

2011-01-19

Peptides

PROTEIN NDRG2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

PROTEIN NDRG2