SMTL ID : 2xo7.1

Crystal structure of a dA:O-allylhydroxylamine-dC basepair in complex with fragment DNA polymerase I from Bacillus stearothermophilus

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.85 Å

Oligo State

monomer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: H.386, R.406, K.410 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.360 Salt bridges: A:H.386, A:R.406, A:K.410 SO4.2: 1 residues within 4Å: Chain A: R.381 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.381 SO4.3: 1 residues within 4Å: Chain A: R.523 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.523 SO4.4: 4 residues within 4Å: Chain A: D.357, Y.358, S.359, Q.360 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.360, A:Q.360

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Muenzel, M. et al., Chemical Discrimination between Dc and 5Medc Via Their Hydroxylamine Adducts. Nucleic Acids Res. (2010)

Release Date

2010-09-15

Peptides

DNA POLYMERASE I: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA POLYMERASE I