SMTL ID : 2xpg.1

Crystal structure of a MHC class I-peptide complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-mer

Ligands

1 x LYS- LEU- ILE- GLU- THR- TYR- PHE- SER- LYS: MYELIN PROTEOLIPID PROTEIN(Non-covalent)

LYS-LEU-ILE-GLU-THR-TYR-PHE-SER-LYS.1: 26 residues within 4Å: Chain A: Y.7, F.9, M.45, Q.62, E.63, N.66, V.67, A.69, Q.70, D.77, T.80, Y.84, Y.99, R.114, D.116, Y.123, T.143, K.146, W.147, E.152, Q.155, L.156, Y.159, T.163, W.167, Y.171 28 PLIP interactions: 28 interactions with chain A Hydrophobic interactions: A:Y.7, A:F.9, A:V.67, A:A.69, A:Q.70, A:Y.123, A:T.143, A:L.156, A:Y.159, A:Y.159, A:Y.159, A:W.167, A:W.167 Hydrogen bonds: A:Y.7, A:Q.62, A:E.63, A:E.63, A:N.66, A:Q.70, A:D.77, A:Y.99, A:D.116, A:K.146, A:Q.155, A:T.163, A:Y.171 pi-Stacking: A:W.147, A:W.147

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mcmahon, R.M. et al., Structure of Hla-A0301 in Complex with a Peptide of Proteolipid Protein: Insights Into the Role of Hla-A Alleles in Susceptibility to Multiple Sclerosis. Acta Crystallogr.,Sect.D (2011)

Release Date

2011-04-27

Peptides

HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, A-3 ALPHA CHAIN: A
BETA-2-MICROGLOBULIN: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, A-3 ALPHA CHAIN

BETA-2-MICROGLOBULIN

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