SMTL ID : 2xqg.1

X-ray Structure of human butyrylcholinesterase inhibited by racemic VR

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-octamer

Ligands

16 x NAG- NAG- FUL: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-FUL.1: 8 residues within 4Å: Chain A: P.333, G.334, F.335, S.336, N.339, N.340 Ligands: UNX.7, UNX.8 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.336, A:G.334 NAG-NAG-FUL.2: 11 residues within 4Å: Chain A: Y.235, E.236, N.239, N.243, K.246, L.247, F.276, V.278, P.279 Ligands: UNX.4, UNX.5 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:N.243, A:K.246, A:L.247 Hydrogen bonds: A:F.276, A:V.278 NAG-NAG-FUL.41: 8 residues within 4Å: Chain B: P.333, G.334, F.335, S.336, N.339, N.340 Ligands: UNX.47, UNX.48 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:S.336, B:G.334 NAG-NAG-FUL.42: 11 residues within 4Å: Chain B: Y.235, E.236, N.239, N.243, K.246, L.247, F.276, V.278, P.279 Ligands: UNX.44, UNX.45 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:N.243, B:K.246, B:L.247 Hydrogen bonds: B:F.276, B:V.278 NAG-NAG-FUL.81: 8 residues within 4Å: Chain C: P.333, G.334, F.335, S.336, N.339, N.340 Ligands: UNX.87, UNX.88 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:S.336, C:G.334 NAG-NAG-FUL.82: 11 residues within 4Å: Chain C: Y.235, E.236, N.239, N.243, K.246, L.247, F.276, V.278, P.279 Ligands: UNX.84, UNX.85 5 PLIP interactions: 5 interactions with chain C Hydrophobic interactions: C:N.243, C:K.246, C:L.247 Hydrogen bonds: C:F.276, C:V.278 NAG-NAG-FUL.121: 8 residues within 4Å: Chain D: P.333, G.334, F.335, S.336, N.339, N.340 Ligands: UNX.127, UNX.128 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:S.336, D:G.334 NAG-NAG-FUL.122: 11 residues within 4Å: Chain D: Y.235, E.236, N.239, N.243, K.246, L.247, F.276, V.278, P.279 Ligands: UNX.124, UNX.125 5 PLIP interactions: 5 interactions with chain D Hydrophobic interactions: D:N.243, D:K.246, D:L.247 Hydrogen bonds: D:F.276, D:V.278 NAG-NAG-FUL.161: 8 residues within 4Å: Chain E: P.333, G.334, F.335, S.336, N.339, N.340 Ligands: UNX.167, UNX.168 1 PLIP interactions: 1 interactions with chain E Hydrogen bonds: E:S.336, E:G.334 NAG-NAG-FUL.162: 11 residues within 4Å: Chain E: Y.235, E.236, N.239, N.243, K.246, L.247, F.276, V.278, P.279 Ligands: UNX.164, UNX.165 5 PLIP interactions: 5 interactions with chain E Hydrophobic interactions: E:N.243, E:K.246, E:L.247 Hydrogen bonds: E:F.276, E:V.278 NAG-NAG-FUL.201: 8 residues within 4Å: Chain F: P.333, G.334, F.335, S.336, N.339, N.340 Ligands: UNX.207, UNX.208 1 PLIP interactions: 1 interactions with chain F Hydrogen bonds: F:S.336, F:G.334 NAG-NAG-FUL.202: 11 residues within 4Å: Chain F: Y.235, E.236, N.239, N.243, K.246, L.247, F.276, V.278, P.279 Ligands: UNX.204, UNX.205 5 PLIP interactions: 5 interactions with chain F Hydrophobic interactions: F:N.243, F:K.246, F:L.247 Hydrogen bonds: F:F.276, F:V.278 NAG-NAG-FUL.241: 8 residues within 4Å: Chain G: P.333, G.334, F.335, S.336, N.339, N.340 Ligands: UNX.247, UNX.248 1 PLIP interactions: 1 interactions with chain G Hydrogen bonds: G:S.336, G:G.334 NAG-NAG-FUL.242: 11 residues within 4Å: Chain G: Y.235, E.236, N.239, N.243, K.246, L.247, F.276, V.278, P.279 Ligands: UNX.244, UNX.245 5 PLIP interactions: 5 interactions with chain G Hydrophobic interactions: G:N.243, G:K.246, G:L.247 Hydrogen bonds: G:F.276, G:V.278 NAG-NAG-FUL.281: 8 residues within 4Å: Chain H: P.333, G.334, F.335, S.336, N.339, N.340 Ligands: UNX.287, UNX.288 1 PLIP interactions: 1 interactions with chain H Hydrogen bonds: H:S.336, H:G.334 NAG-NAG-FUL.282: 11 residues within 4Å: Chain H: Y.235, E.236, N.239, N.243, K.246, L.247, F.276, V.278, P.279 Ligands: UNX.284, UNX.285 5 PLIP interactions: 5 interactions with chain H Hydrophobic interactions: H:N.243, H:K.246, H:L.247 Hydrogen bonds: H:F.276, H:V.278

184 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.3: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP UNX.4: 4 residues within 4Å: Chain A: P.279, Y.280 Ligands: NAG-NAG-FUL.2, UNX.5 Ligand excluded by PLIP UNX.5: 5 residues within 4Å: Chain A: E.236, V.278, P.279 Ligands: NAG-NAG-FUL.2, UNX.4 Ligand excluded by PLIP UNX.6: 3 residues within 4Å: Chain A: N.339, N.340 Ligands: UNX.7 Ligand excluded by PLIP UNX.7: 3 residues within 4Å: Chain A: N.340 Ligands: NAG-NAG-FUL.1, UNX.6 Ligand excluded by PLIP UNX.8: 3 residues within 4Å: Chain A: N.339 Ligands: NAG-NAG-FUL.1, NAG-NAG-FUL.1 Ligand excluded by PLIP UNX.9: 1 residues within 4Å: Chain A: F.327 Ligand excluded by PLIP UNX.10: 6 residues within 4Å: Chain A: G.28, W.54, A.60 Ligands: UNX.11, UNX.12, UNX.14 Ligand excluded by PLIP UNX.11: 7 residues within 4Å: Chain A: L.27, G.28, K.58, Y.59, A.60 Ligands: UNX.10, UNX.12 Ligand excluded by PLIP UNX.12: 9 residues within 4Å: Chain A: L.27, G.28, W.54, N.55, A.56, T.57, K.58 Ligands: UNX.10, UNX.11 Ligand excluded by PLIP UNX.13: 3 residues within 4Å: Chain A: A.60, N.61 Ligands: UNX.14 Ligand excluded by PLIP UNX.14: 2 residues within 4Å: Ligands: UNX.10, UNX.13 Ligand excluded by PLIP UNX.15: 4 residues within 4Å: Chain A: W.54, N.55 Ligands: UNX.16, UNX.17 Ligand excluded by PLIP UNX.16: 2 residues within 4Å: Ligands: UNX.15, UNX.17 Ligand excluded by PLIP UNX.17: 4 residues within 4Å: Chain A: N.55 Ligands: UNX.15, UNX.16, NAG.36 Ligand excluded by PLIP UNX.18: 2 residues within 4Å: Ligands: UNX.19, UNX.20 Ligand excluded by PLIP UNX.19: 2 residues within 4Å: Ligands: UNX.18, UNX.20 Ligand excluded by PLIP UNX.20: 3 residues within 4Å: Chain A: W.410 Ligands: UNX.18, UNX.19 Ligand excluded by PLIP UNX.21: 2 residues within 4Å: Ligands: UNX.22, UNX.23 Ligand excluded by PLIP UNX.22: 4 residues within 4Å: Chain A: N.83, H.124 Ligands: UNX.21, UNX.23 Ligand excluded by PLIP UNX.23: 3 residues within 4Å: Chain A: N.83 Ligands: UNX.21, UNX.22 Ligand excluded by PLIP UNX.24: 2 residues within 4Å: Chain A: R.513 Ligands: UNX.25 Ligand excluded by PLIP UNX.25: 5 residues within 4Å: Chain A: K.511, L.512, R.513 Chain G: R.507 Ligands: UNX.24 Ligand excluded by PLIP UNX.43: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP UNX.44: 4 residues within 4Å: Chain B: P.279, Y.280 Ligands: NAG-NAG-FUL.42, UNX.45 Ligand excluded by PLIP UNX.45: 5 residues within 4Å: Chain B: E.236, V.278, P.279 Ligands: NAG-NAG-FUL.42, UNX.44 Ligand excluded by PLIP UNX.46: 3 residues within 4Å: Chain B: N.339, N.340 Ligands: UNX.47 Ligand excluded by PLIP UNX.47: 3 residues within 4Å: Chain B: N.340 Ligands: NAG-NAG-FUL.41, UNX.46 Ligand excluded by PLIP UNX.48: 3 residues within 4Å: Chain B: N.339 Ligands: NAG-NAG-FUL.41, NAG-NAG-FUL.41 Ligand excluded by PLIP UNX.49: 1 residues within 4Å: Chain B: F.327 Ligand excluded by PLIP UNX.50: 6 residues within 4Å: Chain B: G.28, W.54, A.60 Ligands: UNX.51, UNX.52, UNX.54 Ligand excluded by PLIP UNX.51: 7 residues within 4Å: Chain B: L.27, G.28, K.58, Y.59, A.60 Ligands: UNX.50, UNX.52 Ligand excluded by PLIP UNX.52: 9 residues within 4Å: Chain B: L.27, G.28, W.54, N.55, A.56, T.57, K.58 Ligands: UNX.50, UNX.51 Ligand excluded by PLIP UNX.53: 3 residues within 4Å: Chain B: A.60, N.61 Ligands: UNX.54 Ligand excluded by PLIP UNX.54: 2 residues within 4Å: Ligands: UNX.50, UNX.53 Ligand excluded by PLIP UNX.55: 4 residues within 4Å: Chain B: W.54, N.55 Ligands: UNX.56, UNX.57 Ligand excluded by PLIP UNX.56: 2 residues within 4Å: Ligands: UNX.55, UNX.57 Ligand excluded by PLIP UNX.57: 4 residues within 4Å: Chain B: N.55 Ligands: UNX.55, UNX.56, NAG.76 Ligand excluded by PLIP UNX.58: 2 residues within 4Å: Ligands: UNX.59, UNX.60 Ligand excluded by PLIP UNX.59: 2 residues within 4Å: Ligands: UNX.58, UNX.60 Ligand excluded by PLIP UNX.60: 3 residues within 4Å: Chain B: W.410 Ligands: UNX.58, UNX.59 Ligand excluded by PLIP UNX.61: 2 residues within 4Å: Ligands: UNX.62, UNX.63 Ligand excluded by PLIP UNX.62: 4 residues within 4Å: Chain B: N.83, H.124 Ligands: UNX.61, UNX.63 Ligand excluded by PLIP UNX.63: 3 residues within 4Å: Chain B: N.83 Ligands: UNX.61, UNX.62 Ligand excluded by PLIP UNX.64: 2 residues within 4Å: Chain B: R.513 Ligands: UNX.65 Ligand excluded by PLIP UNX.65: 5 residues within 4Å: Chain B: K.511, L.512, R.513 Chain F: R.507 Ligands: UNX.64 Ligand excluded by PLIP UNX.83: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP UNX.84: 4 residues within 4Å: Chain C: P.279, Y.280 Ligands: NAG-NAG-FUL.82, UNX.85 Ligand excluded by PLIP UNX.85: 5 residues within 4Å: Chain C: E.236, V.278, P.279 Ligands: NAG-NAG-FUL.82, UNX.84 Ligand excluded by PLIP UNX.86: 3 residues within 4Å: Chain C: N.339, N.340 Ligands: UNX.87 Ligand excluded by PLIP UNX.87: 3 residues within 4Å: Chain C: N.340 Ligands: NAG-NAG-FUL.81, UNX.86 Ligand excluded by PLIP UNX.88: 3 residues within 4Å: Chain C: N.339 Ligands: NAG-NAG-FUL.81, NAG-NAG-FUL.81 Ligand excluded by PLIP UNX.89: 1 residues within 4Å: Chain C: F.327 Ligand excluded by PLIP UNX.90: 6 residues within 4Å: Chain C: G.28, W.54, A.60 Ligands: UNX.91, UNX.92, UNX.94 Ligand excluded by PLIP UNX.91: 7 residues within 4Å: Chain C: L.27, G.28, K.58, Y.59, A.60 Ligands: UNX.90, UNX.92 Ligand excluded by PLIP UNX.92: 9 residues within 4Å: Chain C: L.27, G.28, W.54, N.55, A.56, T.57, K.58 Ligands: UNX.90, UNX.91 Ligand excluded by PLIP UNX.93: 3 residues within 4Å: Chain C: A.60, N.61 Ligands: UNX.94 Ligand excluded by PLIP UNX.94: 2 residues within 4Å: Ligands: UNX.90, UNX.93 Ligand excluded by PLIP UNX.95: 4 residues within 4Å: Chain C: W.54, N.55 Ligands: UNX.96, UNX.97 Ligand excluded by PLIP UNX.96: 2 residues within 4Å: Ligands: UNX.95, UNX.97 Ligand excluded by PLIP UNX.97: 4 residues within 4Å: Chain C: N.55 Ligands: UNX.95, UNX.96, NAG.116 Ligand excluded by PLIP UNX.98: 2 residues within 4Å: Ligands: UNX.99, UNX.100 Ligand excluded by PLIP UNX.99: 2 residues within 4Å: Ligands: UNX.98, UNX.100 Ligand excluded by PLIP UNX.100: 3 residues within 4Å: Chain C: W.410 Ligands: UNX.98, UNX.99 Ligand excluded by PLIP UNX.101: 2 residues within 4Å: Ligands: UNX.102, UNX.103 Ligand excluded by PLIP UNX.102: 4 residues within 4Å: Chain C: N.83, H.124 Ligands: UNX.101, UNX.103 Ligand excluded by PLIP UNX.103: 3 residues within 4Å: Chain C: N.83 Ligands: UNX.101, UNX.102 Ligand excluded by PLIP UNX.104: 2 residues within 4Å: Chain C: R.513 Ligands: UNX.105 Ligand excluded by PLIP UNX.105: 5 residues within 4Å: Chain C: K.511, L.512, R.513 Chain H: R.507 Ligands: UNX.104 Ligand excluded by PLIP UNX.123: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP UNX.124: 4 residues within 4Å: Chain D: P.279, Y.280 Ligands: NAG-NAG-FUL.122, UNX.125 Ligand excluded by PLIP UNX.125: 5 residues within 4Å: Chain D: E.236, V.278, P.279 Ligands: NAG-NAG-FUL.122, UNX.124 Ligand excluded by PLIP UNX.126: 3 residues within 4Å: Chain D: N.339, N.340 Ligands: UNX.127 Ligand excluded by PLIP UNX.127: 3 residues within 4Å: Chain D: N.340 Ligands: NAG-NAG-FUL.121, UNX.126 Ligand excluded by PLIP UNX.128: 3 residues within 4Å: Chain D: N.339 Ligands: NAG-NAG-FUL.121, NAG-NAG-FUL.121 Ligand excluded by PLIP UNX.129: 1 residues within 4Å: Chain D: F.327 Ligand excluded by PLIP UNX.130: 6 residues within 4Å: Chain D: G.28, W.54, A.60 Ligands: UNX.131, UNX.132, UNX.134 Ligand excluded by PLIP UNX.131: 7 residues within 4Å: Chain D: L.27, G.28, K.58, Y.59, A.60 Ligands: UNX.130, UNX.132 Ligand excluded by PLIP UNX.132: 9 residues within 4Å: Chain D: L.27, G.28, W.54, N.55, A.56, T.57, K.58 Ligands: UNX.130, UNX.131 Ligand excluded by PLIP UNX.133: 3 residues within 4Å: Chain D: A.60, N.61 Ligands: UNX.134 Ligand excluded by PLIP UNX.134: 2 residues within 4Å: Ligands: UNX.130, UNX.133 Ligand excluded by PLIP UNX.135: 4 residues within 4Å: Chain D: W.54, N.55 Ligands: UNX.136, UNX.137 Ligand excluded by PLIP UNX.136: 2 residues within 4Å: Ligands: UNX.135, UNX.137 Ligand excluded by PLIP UNX.137: 4 residues within 4Å: Chain D: N.55 Ligands: UNX.135, UNX.136, NAG.156 Ligand excluded by PLIP UNX.138: 2 residues within 4Å: Ligands: UNX.139, UNX.140 Ligand excluded by PLIP UNX.139: 2 residues within 4Å: Ligands: UNX.138, UNX.140 Ligand excluded by PLIP UNX.140: 3 residues within 4Å: Chain D: W.410 Ligands: UNX.138, UNX.139 Ligand excluded by PLIP UNX.141: 2 residues within 4Å: Ligands: UNX.142, UNX.143 Ligand excluded by PLIP UNX.142: 4 residues within 4Å: Chain D: N.83, H.124 Ligands: UNX.141, UNX.143 Ligand excluded by PLIP UNX.143: 3 residues within 4Å: Chain D: N.83 Ligands: UNX.141, UNX.142 Ligand excluded by PLIP UNX.144: 2 residues within 4Å: Chain D: R.513 Ligands: UNX.145 Ligand excluded by PLIP UNX.145: 5 residues within 4Å: Chain D: K.511, L.512, R.513 Chain E: R.507 Ligands: UNX.144 Ligand excluded by PLIP UNX.163: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP UNX.164: 4 residues within 4Å: Chain E: P.279, Y.280 Ligands: NAG-NAG-FUL.162, UNX.165 Ligand excluded by PLIP UNX.165: 5 residues within 4Å: Chain E: E.236, V.278, P.279 Ligands: NAG-NAG-FUL.162, UNX.164 Ligand excluded by PLIP UNX.166: 3 residues within 4Å: Chain E: N.339, N.340 Ligands: UNX.167 Ligand excluded by PLIP UNX.167: 3 residues within 4Å: Chain E: N.340 Ligands: NAG-NAG-FUL.161, UNX.166 Ligand excluded by PLIP UNX.168: 3 residues within 4Å: Chain E: N.339 Ligands: NAG-NAG-FUL.161, NAG-NAG-FUL.161 Ligand excluded by PLIP UNX.169: 1 residues within 4Å: Chain E: F.327 Ligand excluded by PLIP UNX.170: 6 residues within 4Å: Chain E: G.28, W.54, A.60 Ligands: UNX.171, UNX.172, UNX.174 Ligand excluded by PLIP UNX.171: 7 residues within 4Å: Chain E: L.27, G.28, K.58, Y.59, A.60 Ligands: UNX.170, UNX.172 Ligand excluded by PLIP UNX.172: 9 residues within 4Å: Chain E: L.27, G.28, W.54, N.55, A.56, T.57, K.58 Ligands: UNX.170, UNX.171 Ligand excluded by PLIP UNX.173: 3 residues within 4Å: Chain E: A.60, N.61 Ligands: UNX.174 Ligand excluded by PLIP UNX.174: 2 residues within 4Å: Ligands: UNX.170, UNX.173 Ligand excluded by PLIP UNX.175: 4 residues within 4Å: Chain E: W.54, N.55 Ligands: UNX.176, UNX.177 Ligand excluded by PLIP UNX.176: 2 residues within 4Å: Ligands: UNX.175, UNX.177 Ligand excluded by PLIP UNX.177: 4 residues within 4Å: Chain E: N.55 Ligands: UNX.175, UNX.176, NAG.196 Ligand excluded by PLIP UNX.178: 2 residues within 4Å: Ligands: UNX.179, UNX.180 Ligand excluded by PLIP UNX.179: 2 residues within 4Å: Ligands: UNX.178, UNX.180 Ligand excluded by PLIP UNX.180: 3 residues within 4Å: Chain E: W.410 Ligands: UNX.178, UNX.179 Ligand excluded by PLIP UNX.181: 2 residues within 4Å: Ligands: UNX.182, UNX.183 Ligand excluded by PLIP UNX.182: 4 residues within 4Å: Chain E: N.83, H.124 Ligands: UNX.181, UNX.183 Ligand excluded by PLIP UNX.183: 3 residues within 4Å: Chain E: N.83 Ligands: UNX.181, UNX.182 Ligand excluded by PLIP UNX.184: 2 residues within 4Å: Chain E: R.513 Ligands: UNX.185 Ligand excluded by PLIP UNX.185: 5 residues within 4Å: Chain D: R.507 Chain E: K.511, L.512, R.513 Ligands: UNX.184 Ligand excluded by PLIP UNX.203: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP UNX.204: 4 residues within 4Å: Chain F: P.279, Y.280 Ligands: NAG-NAG-FUL.202, UNX.205 Ligand excluded by PLIP UNX.205: 5 residues within 4Å: Chain F: E.236, V.278, P.279 Ligands: NAG-NAG-FUL.202, UNX.204 Ligand excluded by PLIP UNX.206: 3 residues within 4Å: Chain F: N.339, N.340 Ligands: UNX.207 Ligand excluded by PLIP UNX.207: 3 residues within 4Å: Chain F: N.340 Ligands: NAG-NAG-FUL.201, UNX.206 Ligand excluded by PLIP UNX.208: 3 residues within 4Å: Chain F: N.339 Ligands: NAG-NAG-FUL.201, NAG-NAG-FUL.201 Ligand excluded by PLIP UNX.209: 1 residues within 4Å: Chain F: F.327 Ligand excluded by PLIP UNX.210: 6 residues within 4Å: Chain F: G.28, W.54, A.60 Ligands: UNX.211, UNX.212, UNX.214 Ligand excluded by PLIP UNX.211: 7 residues within 4Å: Chain F: L.27, G.28, K.58, Y.59, A.60 Ligands: UNX.210, UNX.212 Ligand excluded by PLIP UNX.212: 9 residues within 4Å: Chain F: L.27, G.28, W.54, N.55, A.56, T.57, K.58 Ligands: UNX.210, UNX.211 Ligand excluded by PLIP UNX.213: 3 residues within 4Å: Chain F: A.60, N.61 Ligands: UNX.214 Ligand excluded by PLIP UNX.214: 2 residues within 4Å: Ligands: UNX.210, UNX.213 Ligand excluded by PLIP UNX.215: 4 residues within 4Å: Chain F: W.54, N.55 Ligands: UNX.216, UNX.217 Ligand excluded by PLIP UNX.216: 2 residues within 4Å: Ligands: UNX.215, UNX.217 Ligand excluded by PLIP UNX.217: 4 residues within 4Å: Chain F: N.55 Ligands: UNX.215, UNX.216, NAG.236 Ligand excluded by PLIP UNX.218: 2 residues within 4Å: Ligands: UNX.219, UNX.220 Ligand excluded by PLIP UNX.219: 2 residues within 4Å: Ligands: UNX.218, UNX.220 Ligand excluded by PLIP UNX.220: 3 residues within 4Å: Chain F: W.410 Ligands: UNX.218, UNX.219 Ligand excluded by PLIP UNX.221: 2 residues within 4Å: Ligands: UNX.222, UNX.223 Ligand excluded by PLIP UNX.222: 4 residues within 4Å: Chain F: N.83, H.124 Ligands: UNX.221, UNX.223 Ligand excluded by PLIP UNX.223: 3 residues within 4Å: Chain F: N.83 Ligands: UNX.221, UNX.222 Ligand excluded by PLIP UNX.224: 2 residues within 4Å: Chain F: R.513 Ligands: UNX.225 Ligand excluded by PLIP UNX.225: 5 residues within 4Å: Chain B: R.507 Chain F: K.511, L.512, R.513 Ligands: UNX.224 Ligand excluded by PLIP UNX.243: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP UNX.244: 4 residues within 4Å: Chain G: P.279, Y.280 Ligands: NAG-NAG-FUL.242, UNX.245 Ligand excluded by PLIP UNX.245: 5 residues within 4Å: Chain G: E.236, V.278, P.279 Ligands: NAG-NAG-FUL.242, UNX.244 Ligand excluded by PLIP UNX.246: 3 residues within 4Å: Chain G: N.339, N.340 Ligands: UNX.247 Ligand excluded by PLIP UNX.247: 3 residues within 4Å: Chain G: N.340 Ligands: NAG-NAG-FUL.241, UNX.246 Ligand excluded by PLIP UNX.248: 3 residues within 4Å: Chain G: N.339 Ligands: NAG-NAG-FUL.241, NAG-NAG-FUL.241 Ligand excluded by PLIP UNX.249: 1 residues within 4Å: Chain G: F.327 Ligand excluded by PLIP UNX.250: 6 residues within 4Å: Chain G: G.28, W.54, A.60 Ligands: UNX.251, UNX.252, UNX.254 Ligand excluded by PLIP UNX.251: 7 residues within 4Å: Chain G: L.27, G.28, K.58, Y.59, A.60 Ligands: UNX.250, UNX.252 Ligand excluded by PLIP UNX.252: 9 residues within 4Å: Chain G: L.27, G.28, W.54, N.55, A.56, T.57, K.58 Ligands: UNX.250, UNX.251 Ligand excluded by PLIP UNX.253: 3 residues within 4Å: Chain G: A.60, N.61 Ligands: UNX.254 Ligand excluded by PLIP UNX.254: 2 residues within 4Å: Ligands: UNX.250, UNX.253 Ligand excluded by PLIP UNX.255: 4 residues within 4Å: Chain G: W.54, N.55 Ligands: UNX.256, UNX.257 Ligand excluded by PLIP UNX.256: 2 residues within 4Å: Ligands: UNX.255, UNX.257 Ligand excluded by PLIP UNX.257: 4 residues within 4Å: Chain G: N.55 Ligands: UNX.255, UNX.256, NAG.276 Ligand excluded by PLIP UNX.258: 2 residues within 4Å: Ligands: UNX.259, UNX.260 Ligand excluded by PLIP UNX.259: 2 residues within 4Å: Ligands: UNX.258, UNX.260 Ligand excluded by PLIP UNX.260: 3 residues within 4Å: Chain G: W.410 Ligands: UNX.258, UNX.259 Ligand excluded by PLIP UNX.261: 2 residues within 4Å: Ligands: UNX.262, UNX.263 Ligand excluded by PLIP UNX.262: 4 residues within 4Å: Chain G: N.83, H.124 Ligands: UNX.261, UNX.263 Ligand excluded by PLIP UNX.263: 3 residues within 4Å: Chain G: N.83 Ligands: UNX.261, UNX.262 Ligand excluded by PLIP UNX.264: 2 residues within 4Å: Chain G: R.513 Ligands: UNX.265 Ligand excluded by PLIP UNX.265: 5 residues within 4Å: Chain A: R.507 Chain G: K.511, L.512, R.513 Ligands: UNX.264 Ligand excluded by PLIP UNX.283: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP UNX.284: 4 residues within 4Å: Chain H: P.279, Y.280 Ligands: NAG-NAG-FUL.282, UNX.285 Ligand excluded by PLIP UNX.285: 5 residues within 4Å: Chain H: E.236, V.278, P.279 Ligands: NAG-NAG-FUL.282, UNX.284 Ligand excluded by PLIP UNX.286: 3 residues within 4Å: Chain H: N.339, N.340 Ligands: UNX.287 Ligand excluded by PLIP UNX.287: 3 residues within 4Å: Chain H: N.340 Ligands: NAG-NAG-FUL.281, UNX.286 Ligand excluded by PLIP UNX.288: 3 residues within 4Å: Chain H: N.339 Ligands: NAG-NAG-FUL.281, NAG-NAG-FUL.281 Ligand excluded by PLIP UNX.289: 1 residues within 4Å: Chain H: F.327 Ligand excluded by PLIP UNX.290: 6 residues within 4Å: Chain H: G.28, W.54, A.60 Ligands: UNX.291, UNX.292, UNX.294 Ligand excluded by PLIP UNX.291: 7 residues within 4Å: Chain H: L.27, G.28, K.58, Y.59, A.60 Ligands: UNX.290, UNX.292 Ligand excluded by PLIP UNX.292: 9 residues within 4Å: Chain H: L.27, G.28, W.54, N.55, A.56, T.57, K.58 Ligands: UNX.290, UNX.291 Ligand excluded by PLIP UNX.293: 3 residues within 4Å: Chain H: A.60, N.61 Ligands: UNX.294 Ligand excluded by PLIP UNX.294: 2 residues within 4Å: Ligands: UNX.290, UNX.293 Ligand excluded by PLIP UNX.295: 4 residues within 4Å: Chain H: W.54, N.55 Ligands: UNX.296, UNX.297 Ligand excluded by PLIP UNX.296: 2 residues within 4Å: Ligands: UNX.295, UNX.297 Ligand excluded by PLIP UNX.297: 4 residues within 4Å: Chain H: N.55 Ligands: UNX.295, UNX.296, NAG.316 Ligand excluded by PLIP UNX.298: 2 residues within 4Å: Ligands: UNX.299, UNX.300 Ligand excluded by PLIP UNX.299: 2 residues within 4Å: Ligands: UNX.298, UNX.300 Ligand excluded by PLIP UNX.300: 3 residues within 4Å: Chain H: W.410 Ligands: UNX.298, UNX.299 Ligand excluded by PLIP UNX.301: 2 residues within 4Å: Ligands: UNX.302, UNX.303 Ligand excluded by PLIP UNX.302: 4 residues within 4Å: Chain H: N.83, H.124 Ligands: UNX.301, UNX.303 Ligand excluded by PLIP UNX.303: 3 residues within 4Å: Chain H: N.83 Ligands: UNX.301, UNX.302 Ligand excluded by PLIP UNX.304: 2 residues within 4Å: Chain H: R.513 Ligands: UNX.305 Ligand excluded by PLIP UNX.305: 5 residues within 4Å: Chain C: R.507 Chain H: K.511, L.512, R.513 Ligands: UNX.304 Ligand excluded by PLIP

8 x VR: 2-METHYLPROPYL HYDROGEN (R)-METHYLPHOSPHONATE(Covalent)

VR.26: 10 residues within 4Å: Chain A: G.113, G.114, G.115, S.196, A.197, W.229, L.284, V.286, F.396, H.436 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:W.229, A:L.284, A:V.286, A:F.396 Hydrogen bonds: A:G.114, A:G.115, A:A.197 VR.66: 10 residues within 4Å: Chain B: G.113, G.114, G.115, S.196, A.197, W.229, L.284, V.286, F.396, H.436 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:W.229, B:L.284, B:V.286, B:F.396 Hydrogen bonds: B:G.114, B:G.115, B:A.197 VR.106: 10 residues within 4Å: Chain C: G.113, G.114, G.115, S.196, A.197, W.229, L.284, V.286, F.396, H.436 7 PLIP interactions: 7 interactions with chain C Hydrophobic interactions: C:W.229, C:L.284, C:V.286, C:F.396 Hydrogen bonds: C:G.114, C:G.115, C:A.197 VR.146: 10 residues within 4Å: Chain D: G.113, G.114, G.115, S.196, A.197, W.229, L.284, V.286, F.396, H.436 7 PLIP interactions: 7 interactions with chain D Hydrophobic interactions: D:W.229, D:L.284, D:V.286, D:F.396 Hydrogen bonds: D:G.114, D:G.115, D:A.197 VR.186: 10 residues within 4Å: Chain E: G.113, G.114, G.115, S.196, A.197, W.229, L.284, V.286, F.396, H.436 7 PLIP interactions: 7 interactions with chain E Hydrophobic interactions: E:W.229, E:L.284, E:V.286, E:F.396 Hydrogen bonds: E:G.114, E:G.115, E:A.197 VR.226: 10 residues within 4Å: Chain F: G.113, G.114, G.115, S.196, A.197, W.229, L.284, V.286, F.396, H.436 7 PLIP interactions: 7 interactions with chain F Hydrophobic interactions: F:W.229, F:L.284, F:V.286, F:F.396 Hydrogen bonds: F:G.114, F:G.115, F:A.197 VR.266: 10 residues within 4Å: Chain G: G.113, G.114, G.115, S.196, A.197, W.229, L.284, V.286, F.396, H.436 7 PLIP interactions: 7 interactions with chain G Hydrophobic interactions: G:W.229, G:L.284, G:V.286, G:F.396 Hydrogen bonds: G:G.114, G:G.115, G:A.197 VR.306: 10 residues within 4Å: Chain H: G.113, G.114, G.115, S.196, A.197, W.229, L.284, V.286, F.396, H.436 7 PLIP interactions: 7 interactions with chain H Hydrophobic interactions: H:W.229, H:L.284, H:V.286, H:F.396 Hydrogen bonds: H:G.114, H:G.115, H:A.197

8 x GLY: GLYCINE(Non-covalent)

GLY.27: 5 residues within 4Å: Chain A: L.16, Y.59, W.96, D.127, K.129 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:W.96 Water bridges: A:D.127 Salt bridges: A:K.129 GLY.67: 5 residues within 4Å: Chain B: L.16, Y.59, W.96, D.127, K.129 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:W.96 Salt bridges: B:K.129 GLY.107: 5 residues within 4Å: Chain C: L.16, Y.59, W.96, D.127, K.129 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:W.96 Water bridges: C:D.127 Salt bridges: C:K.129 GLY.147: 5 residues within 4Å: Chain D: L.16, Y.59, W.96, D.127, K.129 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:W.96 Salt bridges: D:K.129 GLY.187: 5 residues within 4Å: Chain E: L.16, Y.59, W.96, D.127, K.129 3 PLIP interactions: 3 interactions with chain E Hydrogen bonds: E:W.96 Water bridges: E:D.127 Salt bridges: E:K.129 GLY.227: 5 residues within 4Å: Chain F: L.16, Y.59, W.96, D.127, K.129 3 PLIP interactions: 3 interactions with chain F Hydrogen bonds: F:W.96 Water bridges: F:D.127 Salt bridges: F:K.129 GLY.267: 5 residues within 4Å: Chain G: L.16, Y.59, W.96, D.127, K.129 2 PLIP interactions: 2 interactions with chain G Hydrogen bonds: G:W.96 Salt bridges: G:K.129 GLY.307: 5 residues within 4Å: Chain H: L.16, Y.59, W.96, D.127, K.129 2 PLIP interactions: 2 interactions with chain H Hydrogen bonds: H:W.96 Salt bridges: H:K.129

16 x SO4: SULFATE ION(Non-functional Binders)

SO4.28: 4 residues within 4Å: Chain A: Q.314, G.411, N.412, N.413 Ligand excluded by PLIP SO4.29: 5 residues within 4Å: Chain A: R.518, F.519 Chain D: F.523, K.526 Ligands: SO4.149 Ligand excluded by PLIP SO4.68: 4 residues within 4Å: Chain B: Q.314, G.411, N.412, N.413 Ligand excluded by PLIP SO4.69: 5 residues within 4Å: Chain B: R.518, F.519 Chain C: F.523, K.526 Ligands: SO4.109 Ligand excluded by PLIP SO4.108: 4 residues within 4Å: Chain C: Q.314, G.411, N.412, N.413 Ligand excluded by PLIP SO4.109: 5 residues within 4Å: Chain B: F.523, K.526 Chain C: R.518, F.519 Ligands: SO4.69 Ligand excluded by PLIP SO4.148: 4 residues within 4Å: Chain D: Q.314, G.411, N.412, N.413 Ligand excluded by PLIP SO4.149: 5 residues within 4Å: Chain A: F.523, K.526 Chain D: R.518, F.519 Ligands: SO4.29 Ligand excluded by PLIP SO4.188: 4 residues within 4Å: Chain E: Q.314, G.411, N.412, N.413 Ligand excluded by PLIP SO4.189: 5 residues within 4Å: Chain E: R.518, F.519 Chain H: F.523, K.526 Ligands: SO4.309 Ligand excluded by PLIP SO4.228: 4 residues within 4Å: Chain F: Q.314, G.411, N.412, N.413 Ligand excluded by PLIP SO4.229: 5 residues within 4Å: Chain F: R.518, F.519 Chain G: F.523, K.526 Ligands: SO4.269 Ligand excluded by PLIP SO4.268: 4 residues within 4Å: Chain G: Q.314, G.411, N.412, N.413 Ligand excluded by PLIP SO4.269: 5 residues within 4Å: Chain F: F.523, K.526 Chain G: R.518, F.519 Ligands: SO4.229 Ligand excluded by PLIP SO4.308: 4 residues within 4Å: Chain H: Q.314, G.411, N.412, N.413 Ligand excluded by PLIP SO4.309: 5 residues within 4Å: Chain E: F.523, K.526 Chain H: R.518, F.519 Ligands: SO4.189 Ligand excluded by PLIP

24 x CA: CALCIUM ION(Non-covalent)

CA.30: 1 residues within 4Å: Chain A: W.80 No protein-ligand interaction detected (PLIP) CA.31: 3 residues within 4Å: Chain A: S.485, T.486, T.506 No protein-ligand interaction detected (PLIP) CA.32: 2 residues within 4Å: Chain A: K.321, Y.418 No protein-ligand interaction detected (PLIP) CA.70: 1 residues within 4Å: Chain B: W.80 No protein-ligand interaction detected (PLIP) CA.71: 3 residues within 4Å: Chain B: S.485, T.486, T.506 No protein-ligand interaction detected (PLIP) CA.72: 2 residues within 4Å: Chain B: K.321, Y.418 No protein-ligand interaction detected (PLIP) CA.110: 1 residues within 4Å: Chain C: W.80 No protein-ligand interaction detected (PLIP) CA.111: 3 residues within 4Å: Chain C: S.485, T.486, T.506 No protein-ligand interaction detected (PLIP) CA.112: 2 residues within 4Å: Chain C: K.321, Y.418 No protein-ligand interaction detected (PLIP) CA.150: 1 residues within 4Å: Chain D: W.80 No protein-ligand interaction detected (PLIP) CA.151: 3 residues within 4Å: Chain D: S.485, T.486, T.506 No protein-ligand interaction detected (PLIP) CA.152: 2 residues within 4Å: Chain D: K.321, Y.418 No protein-ligand interaction detected (PLIP) CA.190: 1 residues within 4Å: Chain E: W.80 No protein-ligand interaction detected (PLIP) CA.191: 3 residues within 4Å: Chain E: S.485, T.486, T.506 No protein-ligand interaction detected (PLIP) CA.192: 2 residues within 4Å: Chain E: K.321, Y.418 No protein-ligand interaction detected (PLIP) CA.230: 1 residues within 4Å: Chain F: W.80 No protein-ligand interaction detected (PLIP) CA.231: 3 residues within 4Å: Chain F: S.485, T.486, T.506 No protein-ligand interaction detected (PLIP) CA.232: 2 residues within 4Å: Chain F: K.321, Y.418 No protein-ligand interaction detected (PLIP) CA.270: 1 residues within 4Å: Chain G: W.80 No protein-ligand interaction detected (PLIP) CA.271: 3 residues within 4Å: Chain G: S.485, T.486, T.506 No protein-ligand interaction detected (PLIP) CA.272: 2 residues within 4Å: Chain G: K.321, Y.418 No protein-ligand interaction detected (PLIP) CA.310: 1 residues within 4Å: Chain H: W.80 No protein-ligand interaction detected (PLIP) CA.311: 3 residues within 4Å: Chain H: S.485, T.486, T.506 No protein-ligand interaction detected (PLIP) CA.312: 2 residues within 4Å: Chain H: K.321, Y.418 No protein-ligand interaction detected (PLIP)

8 x BR: BROMIDE ION(Non-covalent)

BR.33: 2 residues within 4Å: Chain A: R.345, Q.349 Ligand excluded by PLIP BR.73: 2 residues within 4Å: Chain B: R.345, Q.349 Ligand excluded by PLIP BR.113: 2 residues within 4Å: Chain C: R.345, Q.349 Ligand excluded by PLIP BR.153: 2 residues within 4Å: Chain D: R.345, Q.349 Ligand excluded by PLIP BR.193: 2 residues within 4Å: Chain E: R.345, Q.349 Ligand excluded by PLIP BR.233: 2 residues within 4Å: Chain F: R.345, Q.349 Ligand excluded by PLIP BR.273: 2 residues within 4Å: Chain G: R.345, Q.349 Ligand excluded by PLIP BR.313: 2 residues within 4Å: Chain H: R.345, Q.349 Ligand excluded by PLIP

16 x NA: SODIUM ION(Non-functional Binders)

NA.34: 3 residues within 4Å: Chain A: F.523 Chain D: F.523 Ligands: NA.154 Ligand excluded by PLIP NA.40: 1 residues within 4Å: Chain A: Y.383 Ligand excluded by PLIP NA.74: 3 residues within 4Å: Chain B: F.523 Chain C: F.523 Ligands: NA.114 Ligand excluded by PLIP NA.80: 1 residues within 4Å: Chain B: Y.383 Ligand excluded by PLIP NA.114: 3 residues within 4Å: Chain B: F.523 Chain C: F.523 Ligands: NA.74 Ligand excluded by PLIP NA.120: 1 residues within 4Å: Chain C: Y.383 Ligand excluded by PLIP NA.154: 3 residues within 4Å: Chain A: F.523 Chain D: F.523 Ligands: NA.34 Ligand excluded by PLIP NA.160: 1 residues within 4Å: Chain D: Y.383 Ligand excluded by PLIP NA.194: 3 residues within 4Å: Chain E: F.523 Chain H: F.523 Ligands: NA.314 Ligand excluded by PLIP NA.200: 1 residues within 4Å: Chain E: Y.383 Ligand excluded by PLIP NA.234: 3 residues within 4Å: Chain F: F.523 Chain G: F.523 Ligands: NA.274 Ligand excluded by PLIP NA.240: 1 residues within 4Å: Chain F: Y.383 Ligand excluded by PLIP NA.274: 3 residues within 4Å: Chain F: F.523 Chain G: F.523 Ligands: NA.234 Ligand excluded by PLIP NA.280: 1 residues within 4Å: Chain G: Y.383 Ligand excluded by PLIP NA.314: 3 residues within 4Å: Chain E: F.523 Chain H: F.523 Ligands: NA.194 Ligand excluded by PLIP NA.320: 1 residues within 4Å: Chain H: Y.383 Ligand excluded by PLIP

32 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.35: 3 residues within 4Å: Chain A: N.104, N.186, K.188 Ligand excluded by PLIP NAG.36: 3 residues within 4Å: Chain A: R.12, N.55 Ligands: UNX.17 Ligand excluded by PLIP NAG.37: 4 residues within 4Å: Chain A: R.463, K.467, E.480, N.483 Ligand excluded by PLIP NAG.38: 1 residues within 4Å: Chain A: N.254 Ligand excluded by PLIP NAG.75: 3 residues within 4Å: Chain B: N.104, N.186, K.188 Ligand excluded by PLIP NAG.76: 3 residues within 4Å: Chain B: R.12, N.55 Ligands: UNX.57 Ligand excluded by PLIP NAG.77: 4 residues within 4Å: Chain B: R.463, K.467, E.480, N.483 Ligand excluded by PLIP NAG.78: 1 residues within 4Å: Chain B: N.254 Ligand excluded by PLIP NAG.115: 3 residues within 4Å: Chain C: N.104, N.186, K.188 Ligand excluded by PLIP NAG.116: 3 residues within 4Å: Chain C: R.12, N.55 Ligands: UNX.97 Ligand excluded by PLIP NAG.117: 4 residues within 4Å: Chain C: R.463, K.467, E.480, N.483 Ligand excluded by PLIP NAG.118: 1 residues within 4Å: Chain C: N.254 Ligand excluded by PLIP NAG.155: 3 residues within 4Å: Chain D: N.104, N.186, K.188 Ligand excluded by PLIP NAG.156: 3 residues within 4Å: Chain D: R.12, N.55 Ligands: UNX.137 Ligand excluded by PLIP NAG.157: 4 residues within 4Å: Chain D: R.463, K.467, E.480, N.483 Ligand excluded by PLIP NAG.158: 1 residues within 4Å: Chain D: N.254 Ligand excluded by PLIP NAG.195: 3 residues within 4Å: Chain E: N.104, N.186, K.188 Ligand excluded by PLIP NAG.196: 3 residues within 4Å: Chain E: R.12, N.55 Ligands: UNX.177 Ligand excluded by PLIP NAG.197: 4 residues within 4Å: Chain E: R.463, K.467, E.480, N.483 Ligand excluded by PLIP NAG.198: 1 residues within 4Å: Chain E: N.254 Ligand excluded by PLIP NAG.235: 3 residues within 4Å: Chain F: N.104, N.186, K.188 Ligand excluded by PLIP NAG.236: 3 residues within 4Å: Chain F: R.12, N.55 Ligands: UNX.217 Ligand excluded by PLIP NAG.237: 4 residues within 4Å: Chain F: R.463, K.467, E.480, N.483 Ligand excluded by PLIP NAG.238: 1 residues within 4Å: Chain F: N.254 Ligand excluded by PLIP NAG.275: 3 residues within 4Å: Chain G: N.104, N.186, K.188 Ligand excluded by PLIP NAG.276: 3 residues within 4Å: Chain G: R.12, N.55 Ligands: UNX.257 Ligand excluded by PLIP NAG.277: 4 residues within 4Å: Chain G: R.463, K.467, E.480, N.483 Ligand excluded by PLIP NAG.278: 1 residues within 4Å: Chain G: N.254 Ligand excluded by PLIP NAG.315: 3 residues within 4Å: Chain H: N.104, N.186, K.188 Ligand excluded by PLIP NAG.316: 3 residues within 4Å: Chain H: R.12, N.55 Ligands: UNX.297 Ligand excluded by PLIP NAG.317: 4 residues within 4Å: Chain H: R.463, K.467, E.480, N.483 Ligand excluded by PLIP NAG.318: 1 residues within 4Å: Chain H: N.254 Ligand excluded by PLIP

8 x CL: CHLORIDE ION(Non-functional Binders)

CL.39: 1 residues within 4Å: Chain G: T.510 Ligand excluded by PLIP CL.79: 1 residues within 4Å: Chain F: T.510 Ligand excluded by PLIP CL.119: 1 residues within 4Å: Chain H: T.510 Ligand excluded by PLIP CL.159: 1 residues within 4Å: Chain E: T.510 Ligand excluded by PLIP CL.199: 1 residues within 4Å: Chain D: T.510 Ligand excluded by PLIP CL.239: 1 residues within 4Å: Chain B: T.510 Ligand excluded by PLIP CL.279: 1 residues within 4Å: Chain A: T.510 Ligand excluded by PLIP CL.319: 1 residues within 4Å: Chain C: T.510 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wandhammer, M. et al., Structural Study of the Complex Stereoselectivity of Human Butyrylcholinesterase for the Neurotoxic V-Agents. J.Biol.Chem. (2011)

Release Date

2011-03-23

Peptides

CHOLINESTERASE: ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

G
A

H
A

CHOLINESTERASE

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