SMTL ID : 2xqx.1 (1 other biounit)

Structure of the family 32 carbohydrate-binding module from Streptococcus pneumoniae EndoD

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.01 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: G.30, N.33, T.35, D.41, Y.144, N.145 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:G.30, A:T.35, A:D.41, A:D.41, A:Y.144

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 2 residues within 4Å: Chain A: G.71, V.77 2 PLIP interactions: 2 interactions with chain A Water bridges: A:A.72 Salt bridges: A:H.110 ACT.3: 0 residues within 4Å: (No contacts) 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.91, A:Y.91 Water bridges: A:K.118 Salt bridges: A:K.118

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Abbott, D.W. et al., Structural Analysis of a Putative Family 32 Carbohydrate-Binding Module from the Streptococcus Pneumoniae Enzyme Endod. Acta Crystallogr.,Sect.F (2011)

Release Date

2010-11-03

Peptides

ENDO-BETA-N-ACETYLGLUCOSAMINIDASE D: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ENDO-BETA-N-ACETYLGLUCOSAMINIDASE D

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