SMTL ID : 2xs2.1

Crystal structure of the RRM domain of mouse Deleted in azoospermia-like in complex with RNA, UUGUUCUU

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.35 Å

Oligo State

monomer

Ligands

1 x U- G- U- U- C- U- U: 5'-R(*UP*UP*GP*UP*UP*CP*UP*U)-3'(Non-covalent)

U-G-U-U-C-U-U.1: 19 residues within 4Å: Chain A: M.8, T.11, F.13, K.40, I.42, T.43, K.50, Y.52, F.54, K.79, L.80, G.81, P.82, A.83, I.84, R.85, K.86, H.93 Ligands: ZN.2 Protein-ligand interaction information (PLIP) not available

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 2 residues within 4Å: Chain A: H.93 Ligands: U-G-U-U-C-U-U.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.93

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jenkins, H.T. et al., Kinked beta-strands mediate high-affinity recognition of mRNA targets by the germ-cell regulator DAZL. Proc. Natl. Acad. Sci. U.S.A. (2011)

Release Date

2011-10-05

Peptides

DELETED IN AZOOSPERMIA-LIKE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DELETED IN AZOOSPERMIA-LIKE