SMTL ID : 2xsb.1

OgOGA PUGNAc complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.11 Å

Oligo State

monomer

Ligands

1 x GDL: 2-(acetylamido)-2-deoxy-D-glucono-1,5-lactone(Non-covalent)

GDL.1: 14 residues within 4Å: Chain A: G.8, F.9, Y.10, K.39, C.156, Y.160, T.191, I.195, W.219, N.221, A.224, D.226, Y.227, N.254 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:Y.160, A:W.219 Hydrogen bonds: A:G.8, A:Y.10, A:K.39, A:D.115, A:Y.160, A:N.221, A:D.226, A:N.254

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: R.47, W.48, R.49 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schimpl, M. et al., Human Oga Binds Substrates in a Conserved Peptide Recognition Groove. Biochem.J. (2010)

Release Date

2011-03-23

Peptides

HYALURONOGLUCOSAMINIDASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

HYALURONOGLUCOSAMINIDASE

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