SMTL ID : 2xse.1

THE STRUCTURAL BASIS FOR RECOGNITION OF J-BASE CONTAINING DNA BY A NOVEL DNA-BINDING DOMAIN IN JBP1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x NO3: NITRATE ION(Non-functional Binders)

NO3.1: 1 residues within 4Å: Chain A: K.95 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.95, A:K.95

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 4 residues within 4Å: Chain A: S.124, R.126, K.127, V.130 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:S.124, A:R.126, A:R.126 Water bridges: A:V.121, A:K.127, A:K.127, A:K.127, A:K.131

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Heidebrecht, T. et al., The Structural Basis for Recognition of Base J Containing DNA by a Novel DNA Binding Domain in Jbp1. Nucleic Acids Res. (2011)

Release Date

2011-03-30

Peptides

THYMINE DIOXYGENASE JBP1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

THYMINE DIOXYGENASE JBP1

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