SMTL ID : 2xsi.1

Human serum albumin complexed with dansyl-L-glutamate and myristic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

6 x MYR: MYRISTIC ACID(Non-covalent)

MYR.1: 6 residues within 4Å: Chain A: R.117, M.123, Y.138, A.158, Y.161, F.165 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:Y.138, A:Y.138, A:A.158, A:Y.161, A:Y.161, A:Y.161, A:Y.161, A:Y.161, A:F.165 Salt bridges: A:R.117 MYR.2: 8 residues within 4Å: Chain A: L.22, L.66, Y.150, L.251, A.254, R.257, L.283, S.287 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.22, A:L.66, A:L.251, A:L.283 Hydrogen bonds: A:Y.150, A:S.287, A:S.287 Salt bridges: A:R.257 MYR.3: 7 residues within 4Å: Chain A: S.342, V.344, R.348, I.388, N.391, L.453, R.485 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.388, A:N.391 Hydrogen bonds: A:S.342, A:S.342 Salt bridges: A:R.348, A:R.485 MYR.4: 9 residues within 4Å: Chain A: L.387, R.410, Y.411, K.414, L.430, L.457, L.460, F.488, S.489 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:Y.411, A:Y.411, A:Y.411, A:L.430, A:L.457, A:F.488 Hydrogen bonds: A:Y.411, A:Y.411 Salt bridges: A:R.410, A:K.414 MYR.5: 13 residues within 4Å: Chain A: Y.401, N.405, F.507, K.525, A.528, L.529, L.532, V.547, M.548, F.551, A.552, S.579, Q.580 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:F.507, A:K.525, A:A.528, A:L.532, A:L.532, A:M.548, A:F.551, A:F.551, A:Q.580 Hydrogen bonds: A:Y.401 Salt bridges: A:K.525 MYR.6: 7 residues within 4Å: Chain A: R.209, A.210, A.213, D.324, L.327, E.354, S.480 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:A.210, A:A.213, A:L.327

2 x 9NE: DANSYL-L-GLUTAMATE(Non-covalent)

9NE.7: 10 residues within 4Å: Chain A: K.199, W.214, R.218, L.219, R.222, L.238, R.257, L.260, S.287, A.291 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:L.219, A:L.238, A:A.291 Hydrogen bonds: A:K.199, A:R.222, A:A.291 Water bridges: A:R.218, A:R.218 Salt bridges: A:K.199, A:K.199, A:R.218, A:R.222, A:H.242 9NE.8: 9 residues within 4Å: Chain A: I.142, H.146, F.149, L.154, F.157, Y.161, L.185, G.189, K.190 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.114, A:K.190

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ryan, A.J. et al., Structural Basis of Binding of Fluorescent, Site-Specific Dansylated Amino Acids to Human Serum Albumin. J.Struct.Biol. (2011)

Release Date

2010-11-10

Peptides

SERUM ALBUMIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

SERUM ALBUMIN

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