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SMTL ID : 2xsv.1
Crystal structure of L69A mutant Acinetobacter radioresistens catechol 1,2 dioxygenase
Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.80 Å
Oligo State
homo-dimer
Ligands
2 x
FE
:
FE (III) ION
(Non-covalent)
FE.1:
5 residues within 4Å:
Chain A:
Y.167
,
Y.201
,
R.222
,
H.225
,
H.227
5
PLIP interactions
:
4 interactions with chain A
,
1 Ligand-Water interactions
Metal complexes:
A:Y.167
,
A:Y.201
,
A:H.225
,
A:H.227
,
H
2
O.8
FE.3:
5 residues within 4Å:
Chain B:
Y.167
,
Y.201
,
R.222
,
H.225
,
H.227
5
PLIP interactions
:
4 interactions with chain B
,
1 Ligand-Water interactions
Metal complexes:
B:Y.167
,
B:Y.201
,
B:H.225
,
B:H.227
,
H
2
O.19
2 x
PIE
:
1,2-DIACYL-SN-GLYCERO-3-PHOSPHOINOSITOL
(Non-covalent)
PIE.2:
22 residues within 4Å:
Chain A:
L.43
,
E.56
,
K.59
,
G.60
,
L.61
,
Y.63
,
L.64
,
D.66
,
L.73
,
A.77
,
G.207
,
T.208
,
A.211
,
L.212
,
K.215
Chain B:
R.31
,
I.32
,
V.35
,
L.40
,
L.43
,
L.61
Ligands:
PIE.4
15
PLIP interactions
:
9 interactions with chain A
,
6 interactions with chain B
Hydrophobic interactions:
A:L.43
,
A:E.56
,
A:K.59
,
A:L.61
,
A:Y.63
,
A:L.64
,
A:A.77
,
B:R.31
,
B:I.32
,
B:V.35
,
B:L.40
,
B:L.43
Hydrogen bonds:
A:G.207
,
B:R.308
Salt bridges:
A:K.215
PIE.4:
22 residues within 4Å:
Chain A:
R.31
,
I.32
,
V.35
,
L.40
,
L.43
,
L.61
Chain B:
L.43
,
E.56
,
K.59
,
G.60
,
L.61
,
Y.63
,
L.64
,
D.66
,
L.73
,
A.77
,
G.207
,
T.208
,
A.211
,
L.212
,
K.215
Ligands:
PIE.2
16
PLIP interactions
:
10 interactions with chain B
,
6 interactions with chain A
Hydrophobic interactions:
B:L.43
,
B:E.56
,
B:K.59
,
B:L.61
,
B:Y.63
,
B:L.64
,
B:A.77
,
A:R.31
,
A:I.32
,
A:V.35
,
A:L.40
,
A:L.43
Hydrogen bonds:
B:D.66
,
B:G.207
,
A:R.308
Salt bridges:
B:K.215
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Micalella, C. et al., X-Ray Crystallography, Mass Spectrometry and Single Crystal Microspectrophotometry: A Multidisciplinary Characterization of Catechol 1,2 Dioxygenase. Biochim.Biophys.Acta (2011)
Release Date
2010-10-13
Peptides
CATECHOL 1,2 DIOXYGENASE:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
A
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Secondary Structure
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2° Structure
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CATECHOL 1,2 DIOXYGENASE
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