SMTL ID : 2xsx.1

Crystal structure of human beta enolase ENOB

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 5 residues within 4Å: Chain A: Q.167, D.246, E.294, D.319, K.395 6 PLIP interactions: 3 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.246, A:E.294, A:D.319, H2O.11, H2O.14, H2O.20 MG.13: 5 residues within 4Å: Chain B: Q.167, D.246, E.294, D.319, K.395 6 PLIP interactions: 3 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:D.246, B:E.294, B:D.319, H2O.32, H2O.35, H2O.42

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 5 residues within 4Å: Chain A: E.211, D.319, K.344, R.373, S.374 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:E.211, A:D.319, A:S.374 Water bridges: A:Q.167, A:Q.167, A:Q.167, A:Q.167, A:Q.167, A:S.374, A:S.374 Salt bridges: A:K.344, A:R.373 PO4.14: 6 residues within 4Å: Chain B: E.211, D.319, K.344, H.372, R.373, S.374 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:H.372, B:S.374 Water bridges: B:Q.167, B:Q.167, B:Q.167, B:Q.167, B:S.374, B:S.374 Salt bridges: B:K.344, B:R.373

19 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 5 residues within 4Å: Chain A: K.194, T.206, N.207, V.208 Chain B: D.210 Ligand excluded by PLIP EDO.4: 8 residues within 4Å: Chain A: K.203, D.204, A.205, T.206, N.207 Chain B: G.161, N.162, A.215 Ligand excluded by PLIP EDO.5: 4 residues within 4Å: Chain A: E.220, N.221, N.222, L.280 Ligand excluded by PLIP EDO.6: 7 residues within 4Å: Chain A: G.274, E.275, G.278, F.297, T.304, S.307, F.308 Ligand excluded by PLIP EDO.7: 4 residues within 4Å: Chain A: E.181, R.184, I.185, Y.237 Ligand excluded by PLIP EDO.8: 5 residues within 4Å: Chain A: S.310, G.311, V.312, N.313 Ligands: EDO.9 Ligand excluded by PLIP EDO.9: 3 residues within 4Å: Chain A: V.312, N.313 Ligands: EDO.8 Ligand excluded by PLIP EDO.10: 4 residues within 4Å: Chain A: H.191, H.192, G.195 Chain B: L.59 Ligand excluded by PLIP EDO.11: 4 residues within 4Å: Chain A: K.336, N.339, N.364, G.365 Ligand excluded by PLIP EDO.12: 7 residues within 4Å: Chain A: E.22, R.33, A.35, K.121, E.378, D.379 Chain B: R.413 Ligand excluded by PLIP EDO.15: 8 residues within 4Å: Chain A: A.160, G.161, N.162 Chain B: K.203, D.204, A.205, T.206, N.207 Ligand excluded by PLIP EDO.16: 4 residues within 4Å: Chain B: E.220, N.221, N.222, L.280 Ligand excluded by PLIP EDO.17: 5 residues within 4Å: Chain B: H.192, G.195, V.196, A.234 Ligands: EDO.23 Ligand excluded by PLIP EDO.18: 5 residues within 4Å: Chain A: R.10, E.11 Chain B: K.180, M.412, E.416 Ligand excluded by PLIP EDO.19: 5 residues within 4Å: Chain A: D.210 Chain B: K.194, T.206, N.207, V.208 Ligand excluded by PLIP EDO.20: 4 residues within 4Å: Chain B: D.143, L.144, I.145, I.423 Ligand excluded by PLIP EDO.21: 4 residues within 4Å: Chain B: E.275, T.304, S.307, F.308 Ligand excluded by PLIP EDO.22: 4 residues within 4Å: Chain B: E.181, R.184, I.185, Y.237 Ligand excluded by PLIP EDO.23: 3 residues within 4Å: Chain B: H.192, G.195 Ligands: EDO.17 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vollmar, M. et al., Crystal Structure of Human Beta Enolase Enob. To be Published

Release Date

2010-11-10

Peptides

BETA-ENOLASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

BETA-ENOLASE