SMTL ID : 2xt0.2 (1 other biounit)

Dehalogenase DPpA from Plesiocystis pacifica SIR-I

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

8 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: E.221, G.222, A.223, E.224, I.225 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.222, A:G.222, A:E.224, A:I.225 Water bridges: A:E.221, A:A.223 SO4.2: 2 residues within 4Å: Chain A: H.22, R.43 4 PLIP interactions: 4 interactions with chain A Water bridges: A:H.22, A:R.43 Salt bridges: A:H.22, A:R.43 SO4.3: 3 residues within 4Å: Chain A: R.10, D.195, P.199 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.195 Salt bridges: A:R.10 SO4.4: 7 residues within 4Å: Chain A: Q.262 Chain B: Q.262, I.264, R.265, G.266, C.267 Ligands: SO4.8 5 PLIP interactions: 1 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:Q.262, B:Q.262, B:I.264, B:G.266, B:C.267 SO4.5: 5 residues within 4Å: Chain B: E.221, G.222, A.223, E.224, I.225 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:G.222, B:G.222, B:E.224, B:I.225 Water bridges: B:E.221, B:A.223 SO4.6: 2 residues within 4Å: Chain B: H.22, R.43 4 PLIP interactions: 4 interactions with chain B Water bridges: B:H.22, B:R.43 Salt bridges: B:H.22, B:R.43 SO4.7: 3 residues within 4Å: Chain B: R.10, D.195, P.199 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:D.195 Salt bridges: B:R.10 SO4.8: 7 residues within 4Å: Chain A: Q.262, I.264, R.265, G.266, C.267 Chain B: Q.262 Ligands: SO4.4 5 PLIP interactions: 4 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:Q.262, A:I.264, A:G.266, A:C.267, B:Q.262

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hesseler, M. et al., Cloning, Functional Expression, Biochemical Characterization, and Structural Analysis of a Haloalkane Dehalogenase from Plesiocystis Pacifica Sir-1. Appl.Microbiol.Biotechnol. (2011)

Release Date

2011-08-10

Peptides

HALOALKANE DEHALOGENASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

HALOALKANE DEHALOGENASE

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