SMTL ID : 2xtn.1

Crystal structure of GTP-bound human GIMAP2, amino acid residues 1- 234

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)

GTP.1: 21 residues within 4Å: Chain A: T.31, G.32, T.33, G.34, K.35, S.36, A.37, S.50, K.51, L.52, T.56, L.57, T.58, T.146, H.147, E.149, F.182, N.183, N.184, R.185 Ligands: MG.2 25 PLIP interactions: 25 interactions with chain A Hydrogen bonds: A:T.31, A:G.32, A:G.34, A:K.35, A:S.36, A:A.37, A:K.51, A:K.51, A:L.57, A:T.58, A:H.147, A:H.147, A:N.183, A:N.184, A:N.184 Water bridges: A:S.36, A:E.49, A:S.50, A:S.50, A:T.58, A:T.58, A:E.149 Salt bridges: A:E.149 pi-Stacking: A:H.147 pi-Cation interactions: A:H.147

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: S.36, T.58, D.77 Ligands: GTP.1 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:S.36, A:T.58, H2O.2, H2O.5

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schwefel, D. et al., Structural Basis of Oligomerization in Septin-Like Gtpase of Immunity-Associated Protein 2 (Gimap2). Proc.Natl.Acad.Sci.USA (2010)

Release Date

2010-10-20

Peptides

GTPASE IMAP FAMILY MEMBER 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

GTPASE IMAP FAMILY MEMBER 2

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