SMTL ID : 2xto.2 (1 other biounit)

Crystal structure of GDP-bound human GIMAP2, amino acid residues 21- 260

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 18 residues within 4Å: Chain A: T.11, G.12, T.13, G.14, K.15, S.16, A.17, S.30, K.31, L.32, T.126, H.127, E.129, F.162, N.163, N.164, R.165 Ligands: MG.2 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:G.12, A:T.13, A:G.14, A:G.14, A:K.15, A:S.16, A:A.17, A:K.31, A:H.127, A:N.164, A:N.164, A:R.165 Salt bridges: A:E.129 pi-Stacking: A:H.127 pi-Cation interactions: A:H.127

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: S.16, E.29 Ligands: GDP.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:S.16

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schwefel, D. et al., Structural Basis of Oligomerization in Septin-Like Gtpase of Immunity-Associated Protein 2 (Gimap2). Proc.Natl.Acad.Sci.USA (2010)

Release Date

2010-10-20

Peptides

GTPASE IMAP FAMILY MEMBER 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

GTPASE IMAP FAMILY MEMBER 2

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