SMTL ID : 2xum.1 (1 other biounit)

FACTOR INHIBITING HIF (FIH) Q239H MUTANT IN COMPLEX WITH ZN(II), NOG AND ASP-SUBSTRATE PEPTIDE (20-MER)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-2-2-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.199, D.201, H.279 Ligands: OGA.2 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.199, A:D.201, A:H.279, H2O.6 ZN.6: 4 residues within 4Å: Chain C: H.199, D.201, H.279 Ligands: OGA.7 4 PLIP interactions: 3 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:H.199, C:D.201, C:H.279, H2O.12

2 x OGA: N-OXALYLGLYCINE(Non-covalent)

OGA.2: 13 residues within 4Å: Chain A: Y.145, L.188, T.196, H.199, D.201, N.205, F.207, K.214, H.279, I.281, N.294, W.296 Ligands: ZN.1 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.196, A:N.205, A:N.294 Salt bridges: A:K.214, A:H.279 OGA.7: 13 residues within 4Å: Chain C: Y.145, L.188, T.196, H.199, D.201, N.205, F.207, K.214, H.279, I.281, N.294, W.296 Ligands: ZN.6 7 PLIP interactions: 7 interactions with chain C Hydrogen bonds: C:Y.145, C:T.196, C:T.196, C:N.205, C:N.294 Salt bridges: C:K.214, C:H.279

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 4 residues within 4Å: Chain A: R.138, G.140, E.141, E.142 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.141, A:E.142 Salt bridges: A:R.138 SO4.4: 5 residues within 4Å: Chain A: R.143, E.192, G.193, L.285, N.286 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.192, A:N.286 Salt bridges: A:R.143 SO4.5: 3 residues within 4Å: Chain A: D.222, K.311, A.312 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:A.312 Water bridges: A:L.310, A:H.313 Salt bridges: A:K.311 SO4.8: 4 residues within 4Å: Chain C: R.138, G.140, E.141, E.142 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:E.141, C:E.142 Salt bridges: C:R.138 SO4.9: 5 residues within 4Å: Chain C: R.143, E.192, G.193, L.285, N.286 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:N.286 Salt bridges: C:R.143 SO4.10: 3 residues within 4Å: Chain C: D.222, K.311, A.312 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:D.222, C:A.312 Water bridges: C:L.310, C:H.313 Salt bridges: C:K.311

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, M. et al., Asparagine and aspartate hydroxylation of the cytoskeletal ankyrin family is catalyzed by factor-inhibiting hypoxia-inducible factor. J. Biol. Chem. (2011)

Release Date

2010-12-22

Peptides

HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR: AC
ASP-SUBSTRATE PEPTIDE 2: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
S

D
S

HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR

ASP-SUBSTRATE PEPTIDE 2

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