SMTL ID : 2xvj.1 (1 other biounit)

CRYSTAL STRUCTURE OF THE MUTANT BACTERIAL FLAVIN CONTAINING MONOOXYGENASE IN COMPLEX WITH INDOLE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.48 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 31 residues within 4Å: Chain A: G.9, A.10, G.11, P.12, S.13, F.37, E.38, K.39, Q.40, G.45, Q.46, W.47, H.63, M.66, S.72, N.73, L.79, T.124, A.125, V.126, C.161, T.162, G.163, F.165, S.208, F.280, Q.318, S.321, F.322, F.325 Ligands: IND.3 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:F.165 Hydrogen bonds: A:A.10, A:A.10, A:G.11, A:S.13, A:S.13, A:K.39, A:K.39, A:Q.40, A:G.45, A:Q.46, A:Q.46, A:W.47, A:N.73, A:V.126, A:V.126, A:Q.318, A:S.321, A:S.321 Water bridges: A:G.14, A:F.165 Salt bridges: A:H.63 pi-Stacking: A:W.47 FAD.5: 31 residues within 4Å: Chain B: G.9, G.11, P.12, S.13, F.37, E.38, K.39, Q.40, G.45, Q.46, W.47, H.63, S.65, M.66, L.70, S.72, N.73, L.79, T.124, A.125, V.126, C.161, T.162, G.163, F.165, S.208, Q.318, S.321, F.322, F.325 Ligands: IND.7 22 PLIP interactions: 22 interactions with chain B Hydrophobic interactions: B:Q.46, B:L.70, B:F.165 Hydrogen bonds: B:A.10, B:G.11, B:S.13, B:S.13, B:K.39, B:Q.40, B:Q.46, B:Q.46, B:W.47, B:N.73, B:V.126, B:V.126, B:Q.318, B:S.321 Water bridges: B:G.14, B:G.45 Salt bridges: B:H.63 pi-Stacking: B:W.47 pi-Cation interactions: B:K.39

2 x NO3: NITRATE ION(Non-functional Binders)

NO3.2: 9 residues within 4Å: Chain A: H.185, A.186, S.206, S.208, A.209, C.271, T.272, G.273, Y.274 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:S.206, A:S.208, A:S.208, A:A.209, A:C.271, A:G.273, A:Y.274 NO3.6: 8 residues within 4Å: Chain B: H.185, A.186, S.206, S.208, C.271, T.272, G.273, Y.274 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:H.185, B:S.206, B:G.273

2 x IND: INDOLE(Non-covalent)

IND.3: 5 residues within 4Å: Chain A: N.73, F.165, S.208 Ligands: FAD.1, OXY.4 1 PLIP interactions: 1 interactions with chain A pi-Stacking: A:F.165 IND.7: 5 residues within 4Å: Chain B: N.73, F.165, S.208 Ligands: FAD.5, OXY.9 1 PLIP interactions: 1 interactions with chain B pi-Stacking: B:F.165

2 x OXY: OXYGEN MOLECULE(Non-covalent)

OXY.4: 4 residues within 4Å: Chain A: N.73, Q.318, W.319 Ligands: IND.3 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.73 OXY.9: 4 residues within 4Å: Chain B: N.73, Q.318, W.319 Ligands: IND.7 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.73

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.8: 5 residues within 4Å: Chain B: R.19, Q.22, E.26, K.113, A.114 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:Q.22, B:K.113 Salt bridges: B:R.19, B:E.26, B:K.113

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cho, H.J. et al., Structural and Functional Analysis of Bacterial Flavin-Containing Monooxygenase Reveals its Ping-Pong-Type Reaction Mechanism. J.Struct.Biol. (2011)

Release Date

2011-05-04

Peptides

FLAVIN-CONTAINING MONOOXYGENASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

FLAVIN-CONTAINING MONOOXYGENASE

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