SMTL ID : 2xxd.1

HCV-JFH1 NS5B polymerase structure at 1.9 angstrom

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.88 Å

Oligo State

monomer

Ligands

3 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 1 residues within 4Å: Chain A: R.114 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.114, A:R.114, A:R.114 Salt bridges: A:R.114 PO4.2: 1 residues within 4Å: Chain A: Y.101 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.101, A:Y.101 PO4.3: 3 residues within 4Å: Chain A: G.113, R.114, N.117 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.117 Water bridges: A:N.117

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schmitt, M. et al., A Comprehensive Structure-Function Comparison of Hepatitis C Virus Strains Jfh1 and J6 Polymerases Reveals a Key Residue Stimulating Replication in Cell Culture Across Genotypes. J.Virol. (2011)

Release Date

2011-01-12

Peptides

RNA-DIRECTED RNA POLYMERASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RNA-DIRECTED RNA POLYMERASE