SMTL ID : 2xz8.1

CRYSTAL STRUCTURE OF THE LFW ECTODOMAIN OF THE PEPTIDOGLYCAN RECOGNITION PROTEIN LF

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.94 Å

Oligo State

homo-dimer

Ligands

1 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.1: 1 residues within 4Å: Chain A: Y.14 No protein-ligand interaction detected (PLIP)

3 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.2: 3 residues within 4Å: Chain A: A.48, E.49, F.52 No protein-ligand interaction detected (PLIP) PEG.3: 1 residues within 4Å: Chain A: I.21 No protein-ligand interaction detected (PLIP) PEG.5: 5 residues within 4Å: Chain B: I.21, I.62, E.63, G.66, Y.67 No protein-ligand interaction detected (PLIP)

1 x NA: SODIUM ION(Non-functional Binders)

NA.4: 1 residues within 4Å: Chain B: S.64 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:S.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Basbous, N. et al., The Drosophila Peptidoglycan-Recognition Protein Lf Interacts with Peptidoglycan-Recognition Protein Lc to Downregulate the Imd Pathway. Embo Rep. (2011)

Release Date

2011-04-13

Peptides

PEPTIDOGLYCAN-RECOGNITION PROTEIN LF: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

PEPTIDOGLYCAN-RECOGNITION PROTEIN LF