- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- hetero-2-2-2-mer
- Ligands
- 2 x ILE- GLU- THR- ASP: AC-IETD-CHO(Non-covalent)
- 3 x SO4: SULFATE ION(Non-functional Binders)
SO4.3: 5 residues within 4Å:- Chain A: H.27, N.46, G.47, T.48, H.49
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:G.47, A:H.49
- Salt bridges: A:H.27, A:H.49
SO4.5: 4 residues within 4Å:- Chain A: K.9
- Chain B: R.96, K.97
- Chain D: Y.73
4 PLIP interactions:4 interactions with chain B- Water bridges: B:R.96, B:R.96
- Salt bridges: B:R.96, B:K.97
SO4.6: 5 residues within 4Å:- Chain C: H.27, N.46, G.47, T.48, H.49
7 PLIP interactions:7 interactions with chain C- Hydrogen bonds: C:R.45, C:G.47, C:T.48, C:H.49
- Water bridges: C:N.46
- Salt bridges: C:H.27, C:H.49
- 5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.4: 5 residues within 4Å:- Chain B: N.39, E.42, W.45, K.78
- Ligands: ILE-GLU-THR-ASP.2
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:N.39, B:K.78
- Water bridges: B:E.42, B:E.42
EDO.7: 7 residues within 4Å:- Chain B: V.31, Q.90
- Chain C: Y.119, T.122, S.123
- Chain D: E.21, F.24
5 PLIP interactions:1 interactions with chain B, 2 interactions with chain C, 2 interactions with chain D- Hydrogen bonds: B:Q.90, C:T.122, C:T.122, D:E.21
- Water bridges: D:T.94
EDO.8: 7 residues within 4Å:- Chain C: D.88, N.91
- Chain E: L.19, E.20, R.23, D.44, L.53
5 PLIP interactions:1 interactions with chain C, 4 interactions with chain E- Water bridges: C:D.88, E:E.20
- Hydrogen bonds: E:E.20, E:D.44, E:D.44
EDO.9: 5 residues within 4Å:- Chain F: N.74, V.76, T.82, D.105, A.108
4 PLIP interactions:4 interactions with chain F- Water bridges: F:N.74, F:N.109, F:N.109, F:N.109
EDO.10: 4 residues within 4Å:- Chain F: G.124, H.125, L.126, E.127
4 PLIP interactions:4 interactions with chain F- Hydrogen bonds: F:L.126, F:E.127
- Water bridges: F:H.125, F:I.128
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Schroeder, T. et al., Caspase-8 in Complex with Darpin-8.4. To be Published
- Release Date
- 2011-12-28
- Peptides
- CASPASE-8: AC
CASPASE-8: BD
DARPIN-8.4: EF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
CB
BD
DE
EF
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- hetero-2-2-2-mer
- Ligands
- 2 x ILE- GLU- THR- ASP: AC-IETD-CHO(Non-covalent)
- 3 x SO4: SULFATE ION(Non-functional Binders)
- 5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Schroeder, T. et al., Caspase-8 in Complex with Darpin-8.4. To be Published
- Release Date
- 2011-12-28
- Peptides
- CASPASE-8: AC
CASPASE-8: BD
DARPIN-8.4: EF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
CB
BD
DE
EF
F