SMTL ID : 2y3u.1

Crystal structure of apo collagenase G from Clostridium histolyticum at 2.55 Angstrom resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

monomer

Ligands

1 x P6G: HEXAETHYLENE GLYCOL(Non-functional Binders)

P6G.1: 9 residues within 4Å: Chain A: A.182, P.183, D.184, Y.185, N.192, W.242, D.245, V.246, Y.249 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:P.183, A:N.192

1 x FLC: CITRATE ANION(Non-covalent)

FLC.2: 8 residues within 4Å: Chain A: S.473, V.475, Y.523, M.527, W.641, D.642, S.645, K.646 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:Y.523, A:W.641 Hydrogen bonds: A:V.475, A:Y.523, A:Y.523, A:D.642, A:S.645 Salt bridges: A:K.646

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eckhard, U. et al., Structure of Collagenase G Reveals a Chew-and -Digest Mechanism of Bacterial Collagenolysis. Nat.Struct.Mol.Biol. (2011)

Release Date

2011-09-28

Peptides

COLLAGENASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

COLLAGENASE

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