SMTL ID : 2y5b.2 (1 other biounit)

Structure of USP21 in complex with linear diubiquitin-aldehyde

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.189, C.192, C.242, C.245 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.189, A:C.192, A:C.242, A:C.245

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: P.40, K.174, R.262 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:K.174, A:R.262 SO4.3: 2 residues within 4Å: Chain A: E.81, A.82 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.81, A:A.82 SO4.4: 1 residues within 4Å: Chain A: R.125 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.125 SO4.5: 3 residues within 4Å: Chain B: Q.116, R.148, R.150 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:D.115, B:Q.116 Salt bridges: B:R.148, B:R.150

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ye, Y. et al., Polyubiquitin Binding and Cross-Reactivity in the Usp Domain Deubiquitinase Usp21. Embo Rep. (2011)

Release Date

2012-01-25

Peptides

UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 21: A
UBIQUITIN: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 21

UBIQUITIN

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