SMTL ID : 2y6w.1

Structure of a Bcl-w dimer

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

5 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 6 residues within 4Å: Chain A: F.66, A.111, V.114, F.115 Chain B: L.99 Ligands: PGE.4 No protein-ligand interaction detected (PLIP) PEG.2: 4 residues within 4Å: Chain A: D.76, A.79, Q.80, V.83 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.76, A:Q.80 PEG.3: 7 residues within 4Å: Chain A: F.66, R.69, F.70, T.73, V.95 Chain B: F.115 Ligands: PEG.5 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.69 Water bridges: A:R.69 PEG.5: 4 residues within 4Å: Chain B: F.66, A.111, F.115 Ligands: PEG.3 No protein-ligand interaction detected (PLIP) PEG.6: 1 residues within 4Å: Chain B: P.85 No protein-ligand interaction detected (PLIP)

1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.4: 4 residues within 4Å: Chain B: R.69, F.70, L.99 Ligands: PEG.1 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.69

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, E.F. et al., Crystal Structure of a Bcl-W Domain-Swapped Dimer: Implications for the Function of Bcl-2 Family Proteins. Structure (2011)

Release Date

2011-10-26

Peptides

BCL-2-LIKE PROTEIN 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

BCL-2-LIKE PROTEIN 2