SMTL ID : 2y7j.1

Structure of human phosphorylase kinase, gamma 2

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-tetramer

Ligands

4 x B49: N-[2-(diethylamino)ethyl]-5-[(Z)-(5-fluoro-2-oxo-1,2-dihydro-3H-indol-3-ylidene)methyl]-2,4-dimethyl-1H-pyrrole-3-carboxamide(Non-covalent)

B49.1: 16 residues within 4Å: Chain A: V.101, I.102, G.103, R.104, V.110, A.123, I.163, F.179, D.180, L.181, M.182, R.183, G.185, E.186, L.232, D.243 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:I.102, A:V.110, A:I.163, A:F.179, A:L.232, A:L.232 Hydrogen bonds: A:I.102, A:D.180, A:M.182 Water bridges: A:D.189 B49.2: 14 residues within 4Å: Chain B: V.101, I.102, G.103, V.110, A.123, I.163, F.179, D.180, L.181, M.182, R.183, G.185, L.232, D.243 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:I.102, B:V.110, B:I.163, B:F.179, B:F.179, B:L.232, B:L.232 Hydrogen bonds: B:I.102, B:D.180, B:M.182 B49.3: 12 residues within 4Å: Chain C: I.102, V.110, A.123, I.163, F.179, D.180, L.181, M.182, R.183, G.185, D.189, L.232 10 PLIP interactions: 10 interactions with chain C Hydrophobic interactions: C:I.102, C:V.110, C:I.163, C:F.179, C:F.179, C:L.232, C:L.232 Hydrogen bonds: C:I.102, C:D.180, C:M.182 B49.4: 12 residues within 4Å: Chain D: I.102, V.110, A.123, I.163, F.179, D.180, L.181, M.182, R.183, G.185, D.189, L.232 11 PLIP interactions: 11 interactions with chain D Hydrophobic interactions: D:I.102, D:I.102, D:I.102, D:V.110, D:I.163, D:F.179, D:F.179, D:L.232, D:L.232 Hydrogen bonds: D:D.180, D:M.182

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Muniz, J.R.C. et al., Structure of Human Phosphorylase Kinase, Gamma 2. To be Published

Release Date

2011-02-09

Peptides

PHOSPHORYLASE B KINASE GAMMA CATALYTIC CHAIN, TESTIS/LIVER ISOFORM: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

PHOSPHORYLASE B KINASE GAMMA CATALYTIC CHAIN, TESTIS/LIVER ISOFORM