SMTL ID : 2yb7.1 (1 other biounit)

CBM62 in complex with 6-alpha-D-Galactosyl-mannotriose

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x BMA- GLA: alpha-D-galactopyranose-(1-6)-beta-D-mannopyranose(Non-covalent)

BMA-GLA.1: 7 residues within 4Å: Chain A: W.18, D.38, R.67, Y.70, R.73, N.128, N.130 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:D.38, A:R.67, A:R.67, A:Y.70, A:R.73, A:R.73, A:N.128 Water bridges: A:Y.70, A:N.128

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 6 residues within 4Å: Chain A: K.6, L.7, T.8, G.9, V.11, L.49 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.6, A:L.7, A:G.9 Water bridges: A:L.7

1 x CA: CALCIUM ION(Non-covalent)

CA.3: 6 residues within 4Å: Chain A: K.27, D.30, D.32, T.35, A.132, E.133 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:K.27, A:D.30, A:D.32, A:T.35, A:E.133

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Montanier, C.Y. et al., A Novel, Noncatalytic Carbohydrate-Binding Module Displays Specificity for Galactose-Containing Polysaccharides Through Calcium-Mediated Oligomerization. J.Biol.Chem. (2011)

Release Date

2011-08-17

Peptides

CARBOHYDRATE BINDING FAMILY 6: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CARBOHYDRATE BINDING FAMILY 6

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