SMTL ID : 2ybf.1

Complex of Rad18 (Rad6 binding domain) with Rad6b

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

1 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.1: 4 residues within 4Å: Chain A: C.88, D.90, Q.93, N.94 No protein-ligand interaction detected (PLIP)

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: R.8, R.11, P.64 Ligands: NA.3 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.8, A:R.11 SO4.4: 4 residues within 4Å: Chain A: L.73 Chain B: K.2, Y.3, R.4 5 PLIP interactions: 4 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:Y.3, B:R.4 Water bridges: B:K.5, A:R.71 Salt bridges: B:R.4

1 x NA: SODIUM ION(Non-functional Binders)

NA.3: 1 residues within 4Å: Ligands: SO4.2 1 PLIP interactions: 1 interactions with chain A Water bridges: A:R.11

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hibbert, R.G. et al., E3 Ligase Rad18 Promotes Monoubiquitination Rather Than Ubiquitin Chain Formation by E2 Enzyme Rad6. Proc.Natl.Acad.Sci.USA (2011)

Release Date

2011-04-20

Peptides

UBIQUITIN-CONJUGATING ENZYME E2 B: A
E3 UBIQUITIN-PROTEIN LIGASE RAD18: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

UBIQUITIN-CONJUGATING ENZYME E2 B

E3 UBIQUITIN-PROTEIN LIGASE RAD18

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