- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x 6BC: 5-chloro-7-hydroxy-6-(phenylmethyl)pyrazolo[1,5-a]pyrimidine-3-carbonitrile(Non-covalent)
- 6 x CU: COPPER (II) ION(Non-covalent)
CU.2: 3 residues within 4Å:- Chain A: E.67, D.73, L.74
No protein-ligand interaction detected (PLIP)CU.3: 2 residues within 4Å:- Chain A: K.49, D.73
3 PLIP interactions:1 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:D.73, H2O.2, H2O.3
CU.6: 1 residues within 4Å:- Chain A: D.216
2 PLIP interactions:1 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:D.216, H2O.7
CU.14: 3 residues within 4Å:- Chain B: E.67, D.73, L.74
No protein-ligand interaction detected (PLIP)CU.15: 2 residues within 4Å:- Chain B: K.49, D.73
3 PLIP interactions:1 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:D.73, H2O.9, H2O.9
CU.18: 1 residues within 4Å:- Chain B: D.216
2 PLIP interactions:1 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:D.216, H2O.13
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 6 x CD: CADMIUM ION(Non-covalent)
CD.5: 1 residues within 4Å:- Chain A: E.93
4 PLIP interactions:2 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:E.93, A:E.93, H2O.3, H2O.3
CD.9: 3 residues within 4Å:- Chain A: D.187, E.193
- Chain B: K.140
4 PLIP interactions:3 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:D.187, A:D.187, A:E.193, H2O.11
CD.12: 2 residues within 4Å:- Chain A: D.95, N.97
2 PLIP interactions:2 interactions with chain A- Metal complexes: A:D.95, A:D.95
CD.17: 1 residues within 4Å:- Chain B: E.93
4 PLIP interactions:2 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:E.93, B:E.93, H2O.9, H2O.9
CD.21: 3 residues within 4Å:- Chain A: K.140
- Chain B: D.187, E.193
4 PLIP interactions:3 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:D.187, B:D.187, B:E.193, H2O.5
CD.24: 2 residues within 4Å:- Chain B: D.95, N.97
2 PLIP interactions:2 interactions with chain B- Metal complexes: B:D.95, B:D.95
- 4 x ACT: ACETATE ION(Non-functional Binders)
ACT.7: 2 residues within 4Å:- Chain A: L.218, E.221
1 PLIP interactions:1 interactions with chain A- Hydrophobic interactions: A:L.218
ACT.8: 4 residues within 4Å:- Chain A: P.46, E.47, E.117
- Ligands: ZN.11
1 PLIP interactions:1 interactions with chain A- Hydrophobic interactions: A:P.46
ACT.19: 2 residues within 4Å:- Chain B: L.218, E.221
1 PLIP interactions:1 interactions with chain B- Hydrophobic interactions: B:L.218
ACT.20: 4 residues within 4Å:- Chain B: P.46, E.47, E.117
- Ligands: ZN.23
1 PLIP interactions:1 interactions with chain B- Hydrophobic interactions: B:P.46
- 2 x NA: SODIUM ION(Non-functional Binders)
- 2 x ZN: ZINC ION(Non-covalent)
ZN.11: 3 residues within 4Å:- Chain A: E.47, E.117
- Ligands: ACT.8
5 PLIP interactions:4 interactions with chain A, 1 Ligand-Ligand interactions- Metal complexes: A:E.47, A:E.47, A:E.117, A:E.117, ACT.8
ZN.23: 3 residues within 4Å:- Chain B: E.47, E.117
- Ligands: ACT.20
5 PLIP interactions:4 interactions with chain B, 1 Ligand-Ligand interactions- Metal complexes: B:E.47, B:E.47, B:E.117, B:E.117, ACT.20
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Witschel, M.C. et al., Inhibitors of the Herbicidal Target Ispd: Allosteric Site Binding. Angew.Chem.Int.Ed.Engl. (2011)
- Release Date
- 2011-08-24
- Peptides
- 2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE, CHLOROPLASTIC: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x 6BC: 5-chloro-7-hydroxy-6-(phenylmethyl)pyrazolo[1,5-a]pyrimidine-3-carbonitrile(Non-covalent)
- 6 x CU: COPPER (II) ION(Non-covalent)
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 6 x CD: CADMIUM ION(Non-covalent)
- 4 x ACT: ACETATE ION(Non-functional Binders)
- 2 x NA: SODIUM ION(Non-functional Binders)
- 2 x ZN: ZINC ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Witschel, M.C. et al., Inhibitors of the Herbicidal Target Ispd: Allosteric Site Binding. Angew.Chem.Int.Ed.Engl. (2011)
- Release Date
- 2011-08-24
- Peptides
- 2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE, CHLOROPLASTIC: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A