- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.80 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x STL: RESVERATROL(Non-covalent)
- 1 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
NAP.3: 26 residues within 4Å:- Chain A: G.9, T.11, G.12, L.13, L.14, F.34, R.35, R.36, V.44, N.45, L.46, L.47, C.67, A.68, A.69, R.71, L.86, I.108, S.109, Y.133, K.137, I.156, P.157, I.158, L.159
- Ligands: STL.1
27 PLIP interactions:27 interactions with chain A- Hydrophobic interactions: A:I.156, A:L.159, A:L.159
- Hydrogen bonds: A:G.9, A:T.11, A:T.11, A:T.11, A:G.12, A:L.13, A:L.14, A:F.34, A:R.35, A:R.36, A:R.36, A:N.45, A:L.46, A:C.67, A:A.69, A:R.71, A:Y.133, A:K.137, A:L.159
- Water bridges: A:G.15, A:E.168
- Salt bridges: A:R.36, A:R.71, A:R.71
- 7 x SO4: SULFATE ION(Non-functional Binders)
SO4.4: 4 residues within 4Å:- Chain A: Q.192, Q.229, R.265, N.266
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:Q.229, A:N.266
- Salt bridges: A:R.265
SO4.5: 6 residues within 4Å:- Chain A: Y.112, A.170, R.193, K.232, R.263
- Ligands: STL.1
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:Y.112
- Water bridges: A:R.263
- Salt bridges: A:R.193, A:K.232, A:R.263
SO4.6: 5 residues within 4Å:- Chain A: R.301, W.302, R.303
- Chain B: H.28, V.30
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:W.302
- Salt bridges: A:R.301, A:R.303, B:H.28
SO4.10: 2 residues within 4Å:- Chain B: R.4, H.62
5 PLIP interactions:5 interactions with chain B- Water bridges: B:R.4, B:Q.60, B:H.62
- Salt bridges: B:R.4, B:H.62
SO4.11: 4 residues within 4Å:- Chain B: Q.192, Q.229, R.265, N.266
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:Q.229, B:Q.229, B:N.266
- Salt bridges: B:R.265
SO4.12: 5 residues within 4Å:- Chain A: H.28, V.30
- Chain B: R.301, W.302, R.303
2 PLIP interactions:1 interactions with chain B, 1 interactions with chain A- Salt bridges: B:R.303, A:H.28
SO4.13: 5 residues within 4Å:- Chain B: Y.112, R.193, K.232, R.263
- Ligands: STL.7
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:Y.112, B:Y.112
- Salt bridges: B:R.193, B:K.232, B:R.263
- 1 x TXP: 1,4,5,6-TETRAHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE(Non-covalent)
TXP.9: 27 residues within 4Å:- Chain B: G.9, T.11, G.12, L.13, L.14, G.33, F.34, R.35, R.36, V.44, N.45, L.46, L.47, C.67, A.68, A.69, R.71, L.86, I.108, S.109, Y.133, K.137, I.156, P.157, I.158, L.159
- Ligands: STL.7
26 PLIP interactions:26 interactions with chain B- Hydrophobic interactions: B:I.156, B:L.159, B:L.159
- Hydrogen bonds: B:G.9, B:T.11, B:T.11, B:T.11, B:G.12, B:L.13, B:L.14, B:F.34, B:R.35, B:R.36, B:A.37, B:N.45, B:L.46, B:C.67, B:A.69, B:R.71, B:Y.133, B:K.137, B:L.159
- Water bridges: B:V.44
- Salt bridges: B:R.36, B:R.71, B:R.71
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Shafqat, N. et al., Insight Into S-Adenosylmethionine Biosynthesis from the Crystal Structures of the Human Methionine Adenosyltransferase Catalytic and Regulatory Subunits. Biochem.J. (2013)
- Release Date
- 2011-04-27
- Peptides
- METHIONINE ADENOSYLTRANSFERASE 2 SUBUNIT BETA: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
DB
E
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.80 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x STL: RESVERATROL(Non-covalent)
- 1 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
- 7 x SO4: SULFATE ION(Non-functional Binders)
- 1 x TXP: 1,4,5,6-TETRAHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Shafqat, N. et al., Insight Into S-Adenosylmethionine Biosynthesis from the Crystal Structures of the Human Methionine Adenosyltransferase Catalytic and Regulatory Subunits. Biochem.J. (2013)
- Release Date
- 2011-04-27
- Peptides
- METHIONINE ADENOSYLTRANSFERASE 2 SUBUNIT BETA: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
DB
E