SMTL ID : 2yg9.1 (1 other biounit)

Structure of an unusual 3-Methyladenine DNA Glycosylase II (Alka) from Deinococcus radiodurans

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 3 residues within 4Å: Chain A: G.110, S.112, K.115 Ligand excluded by PLIP CL.2: 3 residues within 4Å: Chain A: G.155, W.157, T.158 Ligand excluded by PLIP

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 2 residues within 4Å: Chain A: P.40, V.41 1 PLIP interactions: 1 interactions with chain A Water bridges: A:Q.44

1 x NI: NICKEL (II) ION(Non-covalent)

NI.4: 1 residues within 4Å: Chain A: H.35 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:H.35, H2O.2, H2O.2, H2O.12, H2O.13

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Moe, E. et al., Structure-function studies of an unusual 3-methyladenine DNA glycosylase II (AlkA) from Deinococcus radiodurans. Acta Crystallogr. D Biol. Crystallogr. (2012)

Release Date

2011-04-20

Peptides

DNA-3-methyladenine glycosidase II, putative: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA-3-methyladenine glycosidase II, putative

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