SMTL ID : 2yjd.1

Stapled peptide bound to Estrogen Receptor Beta

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.93 Å

Oligo State

hetero-2-2-mer

Ligands

2 x YJD: 4-(2-PROPAN-2-YLOXYBENZIMIDAZOL-1-YL)PHENOL(Non-covalent)

YJD.1: 18 residues within 4Å: Chain A: M.35, L.38, T.39, L.41, A.42, E.45, M.76, L.79, M.80, L.83, R.86, F.96, I.113, I.116, F.117, L.120, L.216, L.231 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:L.38, A:T.39, A:L.41, A:A.42, A:L.79, A:L.83, A:F.96, A:I.113, A:I.116, A:F.117, A:L.120, A:L.216, A:L.216, A:L.231 Hydrogen bonds: A:L.79, A:R.86 Water bridges: A:R.86 pi-Stacking: A:F.96 YJD.2: 18 residues within 4Å: Chain B: M.35, L.38, T.39, L.41, A.42, E.45, M.76, L.79, M.80, L.83, R.86, F.96, I.113, I.116, F.117, L.120, L.216, L.231 20 PLIP interactions: 20 interactions with chain B Hydrophobic interactions: B:L.38, B:T.39, B:L.41, B:A.42, B:L.79, B:L.83, B:F.96, B:I.113, B:I.113, B:I.116, B:I.116, B:F.117, B:L.120, B:L.216, B:L.216, B:L.231 Hydrogen bonds: B:L.79, B:R.86 Water bridges: B:L.83 pi-Stacking: B:F.96

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Phillips, C. et al., Design and Structure of Stapled Peptides Binding to Estrogen Receptors. J.Am.Chem.Soc. (2011)

Release Date

2011-08-03

Peptides

ESTROGEN RECEPTOR BETA: AB
STAPLED PEPTIDE: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

ESTROGEN RECEPTOR BETA

STAPLED PEPTIDE

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